RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FAM157AC9JC47 383 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 RNASEK-C17orf49H0YIS7 233 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 FCGR3BO75015 233 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 TSC22D2O75157 780 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 HOXB4P17483 251 aaPredicted RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 S100A11P31949 105 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 MAS1LP35410 378 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 AKR1C2P52895 323 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 KRTAP10-9P60411 292 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 SPCS3P61009 180 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 UBE2KP61086 200 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 ERVK-16P61578 105 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 RELBQ01201 579 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 TNFRSF9Q07011 255 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 BAXQ07812 192 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 LTC4SQ16873 150 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 TUSC1Q2TAM9 212 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 TPTE2P1Q5T6R2 138 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 H2BFWTQ7Z2G1 175 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 INO80EQ8NBZ0 244 aaPredicted RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 OR8H1Q8NGG4 311 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 OR5B3Q8NH48 314 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 OR1S1Q8NH92 325 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 TMEM167AQ8TBQ9 72 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 CFHR4Q92496 578 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 LEAP2Q969E1 77 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 PERPQ96FX8 193 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 AJUBAQ96IF1 538 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 GPHA2Q96T91 129 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 SRSF8Q9BRL6 282 aaKnown RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 MRPL20Q9BYC9 149 aaKnown RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 MMP26Q9NRE1 261 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 SLC35D1Q9NTN3 355 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 PRR13Q9NZ81 148 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 MBD2Q9UBB5 411 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 ONECUT1Q9UBC0 465 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 ITGB1BP2Q9UKP3 347 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 PRNDQ9UKY0 176 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 ASH1LQ9NR48 2969 aaKnown RBP8.8□□□□□ -1
PABPN1-203ENST00000553960 C15orf61A6NNL5 157 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 FAM25EA8MYX2 175 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 SYNGR2O43760 224 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 GPR137BO60478 399 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 TOX4O94842 621 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 KRASP01116 189 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 CRYGBP07316 175 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 CXCL2P19875 107 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 GNG10P50151 68 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 VMO1Q7Z5L0 202 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 LINC01356Q8N9X3 169 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 NPBQ8NG41 125 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 STOML3Q8TAV4 291 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 FLYWCH2Q96CP2 140 aaKnown RBP8.79□□□□□ -1
PABPN1-203ENST00000553960 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 MFFQ9GZY8 342 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 MEGF9Q9H1U4 602 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 LYRM2Q9NU23 88 aaPredicted RBP8.79□□□□□ -1
PABPN1-203ENST00000553960 CACNG5Q9UF02 275 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 ITPR2Q14571 2701 aa8.79□□□□□ -1
PABPN1-203ENST00000553960 A0A1W2PPE3 182 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
PABPN1-203ENST00000553960 UPK2O00526 184 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 NDUFA3O95167 84 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 CRYZL1O95825 349 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 IGLV2-23P01705 113 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 IGKV1-16P04430 117 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 ARG1P05089 322 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 COL8A1P27658 744 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 PAX9P55771 341 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 HSPE1P61604 102 aaKnown RBP8.78□□□□□ -1
PABPN1-203ENST00000553960 LCN2P80188 198 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 CXorf66Q5JRM2 361 aaPredicted RBP8.78□□□□□ -1
PABPN1-203ENST00000553960 LDLRAD2Q5SZI1 272 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 OR4A47Q6IF82 309 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 SLC51BQ86UW2 128 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 PNKDQ8N490 385 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 TEX29Q8N6K0 151 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 Q8N6K4 173 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 RPEQ96AT9 228 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 TSNAXQ99598 290 aaKnown RBP8.78□□□□□ -1
PABPN1-203ENST00000553960 REG4Q9BYZ8 158 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 MS4A7Q9GZW8 240 aaPredicted RBP8.78□□□□□ -1
PABPN1-203ENST00000553960 SLC25A31Q9H0C2 315 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 GSKIPQ9P0R6 139 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 HSPB11Q9Y547 144 aa8.78□□□□□ -1
PABPN1-203ENST00000553960 PDZD2O15018 2839 aa8.77□□□□□ -1
PABPN1-203ENST00000553960 SRRM4A7MD48 611 aaKnown RBP8.77□□□□□ -1.01
PABPN1-203ENST00000553960 SMLR1H3BR10 107 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 L7N2F9 121 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 FSHBP01225 129 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 HKR1P10072 659 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 G6PCP35575 357 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 NUP62P37198 522 aaPredicted RBP8.77□□□□□ -1.01
PABPN1-203ENST00000553960 EIF5AP63241 154 aaKnown RBP8.77□□□□□ -1.01
PABPN1-203ENST00000553960 BSXQ3C1V8 233 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 PVRIGQ6DKI7 326 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 C9orf139Q6ZV77 190 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 TMUB2Q71RG4 321 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 ZNF767PQ75MW2 155 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms