RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	VPS13B	Q7Z7G8	4022 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	HMX3	A6NHT5	357 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	LINC00473	A8K010	186 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	C11orf94	C9JXX5	98 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	DYNC1I1	O14576	645 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	SHOX	O15266	292 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	AMBP	P02760	352 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	CRYGC	P07315	174 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	IL6R	P08887	468 aa	Predicted RBP	6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	SAA1	P0DJI8	122 aa	Predicted RBP	6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	MAP2K4	P45985	399 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	IRF3	Q14653	427 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	CDK10	Q15131	360 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	ZNF124	Q15973	351 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	LGALS9B	Q3B8N2	356 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	YIF1B	Q5BJH7	314 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	GLT8D1	Q68CQ7	371 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	OR4A47	Q6IF82	309 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	NKAIN3	Q8N8D7	197 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	SETD9	Q8NE22	299 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	OR11H2	Q8NH07	326 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	TMEM190	Q8WZ59	177 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	CENPN	Q96H22	339 aa	Predicted RBP	6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	NEDD4L	Q96PU5	975 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	RARRES2	Q99969	163 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	MRPL27	Q9P0M9	148 aa	Known RBP	6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	CKLF	Q9UBR5	152 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	AK3	Q9UIJ7	227 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	AP4S1	Q9Y587	144 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846		S4R3C0	116 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	AGRN	O00468	2067 aa		6.59	□□□□□ -1.35
PRKCH-208	ENST00000553846	IGLV11-55	A0A075B6I3	123 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	IGHV4-4	A0A075B6R2	117 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846		A0A1W2PPK0	400 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	ZNF320	A2RRD8	509 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	MFSD2B	A6NFX1	497 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	SAC3D1	A6NKF1	404 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	CGB1	A6NKQ9	187 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	SNTN	A6NMZ2	147 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	TMEM14DP	A8MWL7	114 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	EI24	O14681	340 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	DEFB4A	O15263	64 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	ATP8B1	O43520	1251 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	WBP4	O75554	376 aa	Known RBP	6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	AREG	P15514	252 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	SRM	P19623	302 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	DUT	P33316	252 aa	Known RBP	6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	ADM	P35318	185 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	TAGLN	Q01995	201 aa	Known RBP	6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	FAM106A	Q4KMX7	169 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	DNAL1	Q4LDG9	190 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	ZNF585B	Q52M93	769 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	C1orf100	Q5SVJ3	147 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	RBPMS2	Q6ZRY4	209 aa	Known RBP	6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	SLC38A6	Q8IZM9	456 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846		Q8N1X5	172 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	FAM89B	Q8N5H3	189 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	POM121L12	Q8N7R1	296 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	MAPKAPK5-AS1	Q8N8E1	139 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	CCDC197	Q8NCU1	140 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	CD300LF	Q8TDQ1	290 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	CABLES2	Q9BTV7	478 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	RNF126	Q9BV68	326 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	CSTL1	Q9H114	145 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	OR2D2	Q9H210	308 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	RIMS4	Q9H426	269 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	BABAM2	Q9NXR7	383 aa		6.58	□□□□□ -1.36
PRKCH-208	ENST00000553846	MPPED1	O15442	326 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	SOCS1	O15524	211 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	CRYZL1	O95825	349 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	GIG44	P09565	113 aa	Predicted RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	CD3G	P09693	182 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	ZNF735	P0CB33	412 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	RBMY1A1	P0DJD3	496 aa	Known RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	RBMY1C	P0DJD4	496 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	RRAS	P10301	218 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	FCGR1A	P12314	374 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	RBMY1F	Q15415	496 aa	Known RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	SMN1	Q16637	294 aa	Known RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	RTL8B	Q17RB0	113 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	VMA21	Q3ZAQ7	101 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846		Q6ZTC4	211 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	LRRTM1	Q86UE6	522 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	SLC25A42	Q86VD7	318 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	APRG1	Q8IVJ8	170 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	ZFP41	Q8N8Y5	198 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	OR5B3	Q8NH48	314 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	OSR1	Q8TAX0	266 aa	Predicted RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	ZNF502	Q8TBZ5	544 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	ACOT12	Q8WYK0	555 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	FYTTD1	Q96QD9	318 aa	Known RBP	6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	TMEM59	Q9BXS4	323 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	LPAR5	Q9H1C0	372 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	C12orf4	Q9NQ89	552 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	SLC2A9	Q9NRM0	540 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	CLEC2D	Q9UHP7	191 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	NACA	E9PAV3	2078 aa		6.57	□□□□□ -1.36
PRKCH-208	ENST00000553846	UBR4	Q5T4S7	5183 aa		6.56	□□□□□ -1.36
PRKCH-208	ENST00000553846	TRBV6-7	A0A0A0MS04	114 aa		6.56	□□□□□ -1.36
PRKCH-208	ENST00000553846	TRBV7-1	A0A0A6YYK4	115 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms