RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ATP8B1O43520 1251 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 NDUFB8O95169 186 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 APELAP0DMC3 54 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 FOLR2P14207 255 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 LGALS7P47929 136 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 ETV1P50549 477 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 RPS16P62249 146 aaKnown RBP5.4□□□□□ -1.54
ATXN3-219ENST00000553488 HLA-DRB3P79483 266 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 RHOGP84095 191 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 GUCA2BQ16661 112 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 YIF1BQ5BJH7 314 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 MOB1BQ7L9L4 216 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 C6orf201Q7Z4U5 140 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 CDH26Q8IXH8 852 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF485Q8NCK3 441 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 CACNG8Q8WXS5 425 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 PTX4Q96A99 478 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 C5orf30Q96GV9 206 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 FGF20Q9NP95 211 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-219ENST00000553488 TECRQ9NZ01 308 aaKnown RBP5.4□□□□□ -1.54
ATXN3-219ENST00000553488 ABRACLQ9P1F3 81 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 CKLFQ9UBR5 152 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 TP53TG1Q9Y2A0 90 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-219ENST00000553488 SELENOKQ9Y6D0 94 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 LOC102724200A0A096LPH7 203 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 IGKV1-6A0A0C4DH72 117 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 A0A1W2PPK0 400 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM213A2RRL7 107 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 FAM223BA6NKX1 122 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 SRRM4A7MD48 611 aaKnown RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 A8MWP6 167 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 PPP5D1E7EU14 171 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 LGALS9O00182 355 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 WBP4O75554 376 aaKnown RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 APOA2P02652 100 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 PRH1P02810 166 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 OR9G9P0C7N8 305 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 GCSHP23434 173 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 RPS27AP62979 156 aaKnown RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 UNC119Q13432 240 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 SLC16A13Q7RTY0 426 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 FAM223AQ8IWN6 122 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 HARBI1Q96MB7 349 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 DERL3Q96Q80 235 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 UQCC2Q9BRT2 126 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 NICN1Q9BSH3 213 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 HDHD3Q9BSH5 251 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 FAAP24Q9BTP7 215 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 KCNK15Q9H427 330 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 SLC35D1Q9NTN3 355 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 MLXQ9UH92 298 aa5.39□□□□□ -1.55
ATXN3-219ENST00000553488 RPL36Q9Y3U8 105 aaKnown RBP5.39□□□□□ -1.55
ATXN3-219ENST00000553488 A0A0A6YYD4 124 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 M0R1X1 148 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 HLA-AP01891 365 aaKnown RBP5.38□□□□□ -1.55
ATXN3-219ENST00000553488 CBLN1P23435 193 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 ZBTB25P24278 435 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 HTR2CP28335 458 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 BMI1P35226 326 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 CEACAM6P40199 344 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 DEFB135Q30KP9 77 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 C1orf146Q5VVC0 180 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 OR10K2Q6IF99 312 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 Q6ZWC4 215 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 ZFP41Q8N8Y5 198 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-219ENST00000553488 PHLDA1Q8WV24 401 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-219ENST00000553488 NRG4Q8WWG1 115 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 Q96MT0 163 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 NEDD4LQ96PU5 975 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 SLC29A1Q99808 456 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 TM2D1Q9BX74 207 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM59Q9BXS4 323 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM140Q9NV12 185 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 BABAM2Q9NXR7 383 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 GHRLQ9UBU3 117 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 CLEC2DQ9UHP7 191 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 ORC6Q9Y5N6 252 aa5.38□□□□□ -1.55
ATXN3-219ENST00000553488 FOXI3A8MTJ6 420 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-219ENST00000553488 SPRY2O43597 315 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 SCTP09683 121 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 UBBP0CG47 229 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 DCKP27707 260 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 QRFPP83859 136 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 ATP5G2Q06055 141 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 TNXAQ16473 311 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 PRSS8Q16651 343 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 C15orf32Q32M92 178 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 C10orf55Q5SWW7 151 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 ZNF57Q68EA5 555 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-219ENST00000553488 TMPRSS11AQ6ZMR5 421 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 C19orf35Q6ZS72 473 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 GPHB5Q86YW7 130 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 CBR4Q8N4T8 237 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 NECAP1Q8NC96 275 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 OR52B4Q8NGK2 314 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms