RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 FAM212BQ9NTI7 297 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-213ENST00000546820 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 SIGLEC9Q9Y336 463 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 LINC00854A0A1B0GVQ3 168 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 SRRM4A7MD48 611 aaKnown RBP10.91□□□□□ -0.66
PTCH1-213ENST00000546820 AP4M1O00189 453 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 CREBL2O60519 120 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-213ENST00000546820 B3GALNT1O75752 331 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 HLA-DRB1P01911 266 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 VSIG10L2P0DP72 767 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 NQO2P16083 231 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 PI3P19957 117 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 TAS2R31P59538 309 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 CENPVQ7Z7K6 275 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-213ENST00000546820 PPP1R27Q86WC6 154 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 KCNIP3Q9Y2W7 256 aa10.91□□□□□ -0.66
PTCH1-213ENST00000546820 TEX13DA0A0J9YY54 714 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-213ENST00000546820 RAMP3O60896 148 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 IGLV2-23P01705 113 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 SERPINE2P07093 398 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 LPAR6P43657 344 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 PROK1P58294 105 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 ERVK-16P61578 105 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 CHPT1Q8WUD6 406 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 RHOVQ96L33 236 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 CLCC1Q96S66 551 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-213ENST00000546820 SERTAD4Q9NUC0 356 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 COMMD9Q9P000 198 aa10.9□□□□□ -0.66
PTCH1-213ENST00000546820 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 ACTL6BO94805 426 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 ATG12O94817 140 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 OR2A4O95047 310 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 CNIH1O95406 144 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 CRYGBP07316 175 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 RPA2P15927 270 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 SLC35B1P78383 322 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 CX3CL1P78423 397 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 TMEM267Q0VDI3 215 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-213ENST00000546820 RBMS2Q15434 407 aaKnown RBP10.89□□□□□ -0.67
PTCH1-213ENST00000546820 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 OR4A5Q8NH83 315 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 MRGPRFQ96AM1 343 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 OR2A7Q96R45 310 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 OR51J1Q9H342 316 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 COL6A5A8TX70 2615 aa10.89□□□□□ -0.67
PTCH1-213ENST00000546820 IGHV7-81A0A0B4J1V7 117 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 H0Y980 276 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 FCN1O00602 326 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 IGF1P05019 195 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-213ENST00000546820 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 MMD2Q8IY49 270 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 VKORC1L1Q8N0U8 176 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 KLHDC1Q8N7A1 406 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 ABHD5Q8WTS1 349 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 R3HDM4Q96D70 268 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 WNT10AQ9GZT5 417 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 C5orf66Q9H5L9 145 aa10.88□□□□□ -0.67
PTCH1-213ENST00000546820 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 LYRM1O43325 122 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 UPK1BO75841 260 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 S1PR2O95136 353 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 CA2P00918 260 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 KRASP01116 189 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 AKR1C4P17516 323 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 VDAC1P21796 283 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 MAS1LP35410 378 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 GNB1P62873 340 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 DHODHQ02127 395 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 FXYD3Q14802 87 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 POU2AF1Q16633 256 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 PRSS8Q16651 343 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 MZT2BQ6NZ67 158 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 PUSL1Q8N0Z8 303 aaKnown RBP10.87□□□□□ -0.67
PTCH1-213ENST00000546820 CADM3Q8N126 398 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 STPG2Q8N412 459 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 OR5AU1Q8NGC0 362 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 NAA60Q9H7X0 242 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 PARP11Q9NR21 331 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 VSIG4Q9Y279 399 aa10.87□□□□□ -0.67
PTCH1-213ENST00000546820 PIGBOS1A0A0B4J2F0 54 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 CRYM-AS1A6NIL9 109 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 PLA2G10O15496 165 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 SNAPC5O75971 98 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 KBTBD11O94819 623 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 ANXA3P12429 323 aa10.86□□□□□ -0.67
PTCH1-213ENST00000546820 CCR6P51684 374 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms