RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CRYGBP07316 175 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 PPP5CP53041 499 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 BRWD1-AS2P59051 145 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 AP3S2P59780 193 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 PJVKQ0ZLH3 352 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 FXYD3Q14802 87 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 ZNF79Q15937 498 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 KHDC1LQ5JSQ8 128 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 LHFPL1Q86WI0 220 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 AIFM2Q9BRQ8 373 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 BATF3Q9NR55 127 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 MCUBQ9NWR8 336 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 TRAV41A0A0B4J266 112 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 RBFOX2O43251 390 aaKnown RBP eCLIP13.23□□□□□ -0.29
LTBR-215ENST00000546296 OPN1MWP04001 364 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 ZNF735P0CB33 412 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 SAA1P0DJI8 122 aaPredicted RBP13.23□□□□□ -0.29
LTBR-215ENST00000546296 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 TMEM267Q0VDI3 215 aaPredicted RBP13.23□□□□□ -0.29
LTBR-215ENST00000546296 C2orf68Q2NKX9 166 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 TBC1D26Q86UD7 250 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 TOMM5Q8N4H5 51 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 COMMD1Q8N668 190 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 GRPEL2Q8TAA5 225 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 PRRT1Q99946 306 aa13.23□□□□□ -0.29
LTBR-215ENST00000546296 A0A1W2PRX2 142 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 G3V318 75 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 CREBL2O60519 120 aaPredicted RBP13.22□□□□□ -0.29
LTBR-215ENST00000546296 ACTL6BO94805 426 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 OR2A4O95047 310 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 HPRT1P00492 218 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 PI3P19957 117 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 F2RP25116 425 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 FAUP35544 74 aaKnown RBP13.22□□□□□ -0.29
LTBR-215ENST00000546296 ECI1P42126 302 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 INPP1P49441 399 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 NDPQ00604 133 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 CD83Q01151 205 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 PRSS8Q16651 343 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 SSX9Q7RTT3 188 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 OR51S1Q8NGJ8 323 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 MARCH1Q8TCQ1 289 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 ARPC1AQ92747 370 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 ZNF486Q96H40 463 aaPredicted RBP13.22□□□□□ -0.29
LTBR-215ENST00000546296 RHOVQ96L33 236 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 OR2A7Q96R45 310 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 SRRQ9GZT4 340 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 SCP2D1Q9UJQ7 156 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
LTBR-215ENST00000546296 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
LTBR-215ENST00000546296 NQO2P16083 231 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 LPAR6P43657 344 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 TAS2R31P59538 309 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 TNXAQ16473 311 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 ZNF57Q68EA5 555 aaPredicted RBP13.21□□□□□ -0.29
LTBR-215ENST00000546296 GDPD1Q8N9F7 314 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 TRIM63Q969Q1 353 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
LTBR-215ENST00000546296 PLEKHA2Q9HB19 425 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 COPZ2Q9P299 210 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 FBXO7Q9Y3I1 522 aa13.21□□□□□ -0.29
LTBR-215ENST00000546296 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 MPPED1O15442 326 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 S1PR2O95136 353 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 PIGPP57054 158 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 ERVK-16P61578 105 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 FOXE3Q13461 319 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 KLF9Q13886 244 aaPredicted RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 CXorf66Q5JRM2 361 aaPredicted RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 TMEM65Q6PI78 240 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 UNQ5815/PRO19632Q6UWF5 114 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 MMD2Q8IY49 270 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 DMBX1Q8NFW5 382 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 PHB2Q99623 299 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 HRASLSQ9HDD0 168 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
LTBR-215ENST00000546296 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
LTBR-215ENST00000546296 KBTBD11O94819 623 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 IGHG4P01861 327 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 SERPINE2P07093 398 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 CTSDP07339 412 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms