RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IGHV7-81A0A0B4J1V7 117 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 MPPED1O15442 326 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 KCNAB3O43448 404 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 CTSDP07339 412 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-211ENST00000546215 UBE2KP61086 200 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 PPP1R27Q86WC6 154 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 KLHDC1Q8N7A1 406 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 C3orf56Q8N813 242 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 WIPF2Q8TF74 440 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-211ENST00000546215 RTBDNQ9BSG5 229 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-211ENST00000546215 CCDC32Q9BV29 185 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 ZNF747Q9BV97 191 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 C5orf66Q9H5L9 145 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 TNCP24821 2201 aa16.41■□□□□ 0.22
SCARB1-211ENST00000546215 HPRT1P00492 218 aa16.4■□□□□ 0.22
SCARB1-211ENST00000546215 ZNF585BQ52M93 769 aa16.4■□□□□ 0.22
SCARB1-211ENST00000546215 VKORC1L1Q8N0U8 176 aa16.4■□□□□ 0.22
SCARB1-211ENST00000546215 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
SCARB1-211ENST00000546215 TEX45Q8NA69 505 aa16.4■□□□□ 0.22
SCARB1-211ENST00000546215 NOL4LQ96MY1 436 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-211ENST00000546215 SAA1P0DJI8 122 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-211ENST00000546215 CD40LGP29965 261 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 PJVKQ0ZLH3 352 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 MRGPRG-AS1Q2M3A8 158 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 VMA21Q3ZAQ7 101 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 CLCC1Q96S66 551 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 PLEKHA2Q9HB19 425 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 FAM212BQ9NTI7 297 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-211ENST00000546215 LINC00527Q9UJ94 153 aa16.39■□□□□ 0.21
SCARB1-211ENST00000546215 LINC00854A0A1B0GVQ3 168 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 AP4M1O00189 453 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 HRASP01112 189 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 CX3CL1P78423 397 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 NDPQ00604 133 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 SRSF4Q08170 494 aaKnown RBP16.38■□□□□ 0.21
SCARB1-211ENST00000546215 ZNF562Q6V9R5 426 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 FOXRED2Q8IWF2 684 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 RHOVQ96L33 236 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 WDR12Q9GZL7 423 aaKnown RBP16.38■□□□□ 0.21
SCARB1-211ENST00000546215 OR51J1Q9H342 316 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 COPZ2Q9P299 210 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 C14orf166Q9Y224 244 aaKnown RBP16.38■□□□□ 0.21
SCARB1-211ENST00000546215 VSIG4Q9Y279 399 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 S1PR2O95136 353 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 CA2P00918 260 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 IGF1P05019 195 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 TAS2R31P59538 309 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 SSBP2P81877 361 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-211ENST00000546215 ZNF846Q147U1 533 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 STPG2Q8N412 459 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 CCDC71LQ8N9Z2 235 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 SCGB3A2Q96PL1 93 aa16.38■□□□□ 0.21
SCARB1-211ENST00000546215 NAP1L6A6NFF2 107 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 NQO2P16083 231 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 LPAR6P43657 344 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 POU2AF1Q16633 256 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 PUSL1Q8N0Z8 303 aaKnown RBP16.37■□□□□ 0.21
SCARB1-211ENST00000546215 CITED1Q99966 193 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 COMMD9Q9P000 198 aa16.37■□□□□ 0.21
SCARB1-211ENST00000546215 PLA2G10O15496 165 aa16.36■□□□□ 0.21
SCARB1-211ENST00000546215 SSX9Q7RTT3 188 aa16.36■□□□□ 0.21
SCARB1-211ENST00000546215 CENPVQ7Z7K6 275 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-211ENST00000546215 CHPT1Q8WUD6 406 aa16.36■□□□□ 0.21
SCARB1-211ENST00000546215 SLC25A21Q9BQT8 299 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-211ENST00000546215 C7orf50Q9BRJ6 194 aaKnown RBP16.36■□□□□ 0.21
SCARB1-211ENST00000546215 AIFM2Q9BRQ8 373 aa16.36■□□□□ 0.21
SCARB1-211ENST00000546215 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
SCARB1-211ENST00000546215 H0Y980 276 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 ARPC1BO15143 372 aaKnown RBP16.35■□□□□ 0.21
SCARB1-211ENST00000546215 ATP6V0E1O15342 81 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 OR2A4O95047 310 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 CCR6P51684 374 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 PRSS8Q16651 343 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 C10orf99Q6UWK7 81 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 VSTM2AQ8TAG5 236 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 OR2A7Q96R45 310 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 TP53RKQ96S44 253 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 PARP11Q9NR21 331 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 FBXO7Q9Y3I1 522 aa16.35■□□□□ 0.21
SCARB1-211ENST00000546215 C3orf85A0A1B0GTC6 90 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 CENPXA8MT69 81 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 IL6RP08887 468 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-211ENST00000546215 EGR2P11161 476 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-211ENST00000546215 BTCP35070 178 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 OR4A47Q6IF82 309 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 SHISA2Q6UWI4 295 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 ZNF329Q86UD4 541 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 ADAD2Q8NCV1 583 aaKnown RBP16.34■□□□□ 0.21
SCARB1-211ENST00000546215 OR5AU1Q8NGC0 362 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 TMEM230Q96A57 120 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 R3HDM4Q96D70 268 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-211ENST00000546215 PSMB11A5LHX3 300 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 CRYM-AS1A6NIL9 109 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 MARCH11A6NNE9 402 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 KBTBD11O94819 623 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 IGKV1-39P01597 117 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 IGKV1D-39P04432 117 aa16.34■□□□□ 0.21
SCARB1-211ENST00000546215 FXYD3Q14802 87 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms