RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TBC1D26Q86UD7 250 aa16.16■□□□□ 0.18
HMGA2-211ENST00000545998 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
HMGA2-211ENST00000545998 ZFAND1Q8TCF1 268 aa16.16■□□□□ 0.18
HMGA2-211ENST00000545998 CD300LFQ8TDQ1 290 aa16.16■□□□□ 0.18
HMGA2-211ENST00000545998 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
HMGA2-211ENST00000545998 NOL4LQ96MY1 436 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-211ENST00000545998 F2RP25116 425 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 SURF2Q15527 256 aaPredicted RBP16.15■□□□□ 0.18
HMGA2-211ENST00000545998 VMA21Q3ZAQ7 101 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 PPP1R27Q86WC6 154 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 TEX45Q8NA69 505 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 POC5Q8NA72 575 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 CITED1Q99966 193 aa16.15■□□□□ 0.18
HMGA2-211ENST00000545998 AP4M1O00189 453 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 IGF1P05019 195 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 CTSDP07339 412 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-211ENST00000545998 SAA1P0DJI8 122 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-211ENST00000545998 IL7P13232 177 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 PIGPP57054 158 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 MRGPRG-AS1Q2M3A8 158 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 TCTEX1D1Q8N7M0 179 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 CLCC1Q96S66 551 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 OR51J1Q9H342 316 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 LINC00527Q9UJ94 153 aa16.14■□□□□ 0.17
HMGA2-211ENST00000545998 VWFP04275 2813 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 MPPED1O15442 326 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 HPRT1P00492 218 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 CA2P00918 260 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 INPP1P49441 399 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 CX3CL1P78423 397 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 NDPQ00604 133 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 PJVKQ0ZLH3 352 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 SHISA2Q6UWI4 295 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF562Q6V9R5 426 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 VKORC1L1Q8N0U8 176 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 STPG2Q8N412 459 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 CHPT1Q8WUD6 406 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 RTBDNQ9BSG5 229 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-211ENST00000545998 FAM212BQ9NTI7 297 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF580Q9UK33 172 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 GPR132Q9UNW8 380 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 HRASP01112 189 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF585BQ52M93 769 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 CENPVQ7Z7K6 275 aaPredicted RBP16.13■□□□□ 0.17
HMGA2-211ENST00000545998 RHOVQ96L33 236 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 C5orf66Q9H5L9 145 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 PLEKHA2Q9HB19 425 aa16.13■□□□□ 0.17
HMGA2-211ENST00000545998 CMYA5Q8N3K9 4069 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 ATP6V0E1O15342 81 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 S1PR2O95136 353 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 TAS2R31P59538 309 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 SSBP2P81877 361 aaPredicted RBP16.12■□□□□ 0.17
HMGA2-211ENST00000545998 PUSL1Q8N0Z8 303 aaKnown RBP16.12■□□□□ 0.17
HMGA2-211ENST00000545998 CCDC32Q9BV29 185 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 PARP11Q9NR21 331 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 COMMD9Q9P000 198 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 COPZ2Q9P299 210 aa16.12■□□□□ 0.17
HMGA2-211ENST00000545998 C14orf166Q9Y224 244 aaKnown RBP16.12■□□□□ 0.17
HMGA2-211ENST00000545998 NQO2P16083 231 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 POU2AF1Q16633 256 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 PRSS8Q16651 343 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 C10orf99Q6UWK7 81 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 CCDC71LQ8N9Z2 235 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 OR5AU1Q8NGC0 362 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 AIFM2Q9BRQ8 373 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 VSIG4Q9Y279 399 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 FBXO7Q9Y3I1 522 aa16.11■□□□□ 0.17
HMGA2-211ENST00000545998 PSMB11A5LHX3 300 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 ARPC1BO15143 372 aaKnown RBP16.1■□□□□ 0.17
HMGA2-211ENST00000545998 OR2A4O95047 310 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 EGR2P11161 476 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-211ENST00000545998 LPAR6P43657 344 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 CRIP2P52943 208 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF329Q86UD4 541 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 VSTM2AQ8TAG5 236 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 PKD1L1Q8TDX9 2849 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 SCGB3A2Q96PL1 93 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 OR2A7Q96R45 310 aa16.1■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF430Q9H8G1 570 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-211ENST00000545998 NAP1L6A6NFF2 107 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 KBTBD11O94819 623 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 CD28P10747 220 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 CD40LGP29965 261 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 CFHR3Q02985 330 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 SSX9Q7RTT3 188 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 C11orf44Q8N8P7 122 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
HMGA2-211ENST00000545998 TET2Q6N021 2002 aaPredicted RBP16.09■□□□□ 0.17
HMGA2-211ENST00000545998 LINC00854A0A1B0GVQ3 168 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 H0Y980 276 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 FBXO24O75426 580 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 GNB1P62873 340 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 ZNF846Q147U1 533 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 FXYD3Q14802 87 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 OR4A47Q6IF82 309 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 TMEM167AQ8TBQ9 72 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 ARPC1AQ92747 370 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 R3HDM4Q96D70 268 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 TP53RKQ96S44 253 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 GON7Q9BXV9 100 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms