RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 SCAF4O95104 1147 aaKnown RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 COL8A2P25067 703 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 RPP30P78346 268 aaKnown RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 RELBQ01201 579 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 TFF3Q07654 80 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 ATRAIDQ6UW56 229 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 NKX6-2Q9C056 277 aaPredicted RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 WDR61Q9GZS3 305 aaKnown RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 ATRXP46100 2492 aa13.63□□□□□ -0.23
CHFR-224ENST00000545046 RTL8BQ17RB0 113 aa13.63□□□□□ -0.23
CHFR-224ENST00000545046 RHOVQ96L33 236 aa13.63□□□□□ -0.23
CHFR-224ENST00000545046 RSG1Q9BU20 258 aa13.63□□□□□ -0.23
CHFR-224ENST00000545046 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
CHFR-224ENST00000545046 A0A1B0GV50 99 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 LYNX1G3V0Z9 82 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 CT45A6P0DMU7 189 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 CT45A5P0DMU8 189 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 CT45A7P0DMV0 189 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 LYNX1P0DP58 116 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 RAB2AP61019 212 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 SERF2P84101 59 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 TAF15Q92804 592 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHFR-224ENST00000545046 TMEM147Q9BVK8 224 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 SLC35D1Q9NTN3 355 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 UBE2L5PA0A1B0GUS4 154 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 ZNF833PQ6ZTB9 187 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 ZNF429Q86V71 674 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 RAB1BQ9H0U4 201 aa13.62□□□□□ -0.23
CHFR-224ENST00000545046 HEYLQ9NQ87 328 aaPredicted RBP13.62□□□□□ -0.23
CHFR-224ENST00000545046 TET2Q6N021 2002 aaPredicted RBP13.61□□□□□ -0.23
CHFR-224ENST00000545046 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 GPR37O15354 613 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 FSTL3O95633 263 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 GNB2P62879 340 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 GUCA2BQ16661 112 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 PDLIM3Q53GG5 364 aaPredicted RBP13.61□□□□□ -0.23
CHFR-224ENST00000545046 DHRS7BQ6IAN0 325 aaPredicted RBP13.61□□□□□ -0.23
CHFR-224ENST00000545046 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 ZNRD1Q9P1U0 126 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 COL6A6A6NMZ7 2263 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 CHD8Q9HCK8 2581 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 TRBV23-1A0A0A0MS06 115 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 HBE1P02100 147 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 C8orf31Q8N9H6 132 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 OR13D1Q8NGV5 346 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 SFT2D1Q8WV19 159 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 CBLN4Q9NTU7 201 aa13.61□□□□□ -0.23
CHFR-224ENST00000545046 RALYQ9UKM9 306 aaKnown RBP13.61□□□□□ -0.23
CHFR-224ENST00000545046 ANKHD1Q8IWZ3 2542 aaKnown RBP13.6□□□□□ -0.23
CHFR-224ENST00000545046 A0A1B0GW64 132 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 SNAPINO95295 136 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 IFNA10P01566 189 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 TMEM155Q4W5P6 130 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 PUSL1Q8N0Z8 303 aaKnown RBP13.6□□□□□ -0.23
CHFR-224ENST00000545046 OR10X1Q8NGY0 326 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 TIMM9Q9Y5J7 89 aa13.6□□□□□ -0.23
CHFR-224ENST00000545046 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 C9JQL5 133 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 J3QR06 171 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 APOA2P02652 100 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 PPT1P50897 306 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 DLX6P56179 175 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
CHFR-224ENST00000545046 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
CHFR-224ENST00000545046 LINC00311Q8N616 119 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 TCF19Q9Y242 345 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 FOXA2Q9Y261 457 aaPredicted RBP13.59□□□□□ -0.23
CHFR-224ENST00000545046 NCOR2Q9Y618 2525 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 C15orf62A8K5M9 175 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 FAM157AC9JC47 383 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
CHFR-224ENST00000545046 ZNF596Q8TC21 504 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 KPTNQ9Y664 436 aa13.59□□□□□ -0.23
CHFR-224ENST00000545046 ARG1P05089 322 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 FGF7P21781 194 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 VDAC2P45880 294 aaPredicted RBP13.58□□□□□ -0.24
CHFR-224ENST00000545046 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
CHFR-224ENST00000545046 CCL20P78556 96 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 TMEM186Q96B77 213 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 SMDT1Q9H4I9 107 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 ENY2Q9NPA8 101 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 RBFOX3A6NFN3 312 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 H7C2Y5 167 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 IGHV1-8P0DP01 117 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 C4orf17Q53FE4 359 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 TMEM41BQ5BJD5 291 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 FAM71F2Q6NXP2 309 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms