RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 H0Y980 276 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 S1PR2O95136 353 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NDUFB6O95139 128 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SERPINE2P07093 398 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TAS2R31P59538 309 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FOXL1Q12952 345 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ASAH1Q13510 395 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 DMBX1Q8NFW5 382 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C16orf95Q9H693 158 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NAA60Q9H7X0 242 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 PLEKHA2Q9HB19 425 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 BEX1Q9HBH7 125 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CRYM-AS1A6NIL9 109 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR5AC1P0C628 307 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VSIG10L2P0DP72 767 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NQO2P16083 231 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VDAC2P45880 294 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 DEFA1P59665 94 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 DEFA3P59666 94 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 UBE2KP61086 200 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ERVK-16P61578 105 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TRIM16LQ309B1 348 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TMEM95Q3KNT9 176 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SP6Q3SY56 376 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ZNF585BQ52M93 769 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 Q8N2B8 174 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 LINC01006Q8NI28 216 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TMEM230Q96A57 120 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RHOVQ96L33 236 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TPSG1Q9NRR2 321 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FAM212BQ9NTI7 297 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 COMMD9Q9P000 198 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 KCNIP3Q9Y2W7 256 aa11.48□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FAM240BA0A1B0GVZ2 78 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 KCNAB3O43448 404 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 B3GALNT1O75752 331 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR2A4O95047 310 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HLA-DRB1P01911 266 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RPA2P15927 270 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SLC6A1P30531 599 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VSTM2AQ8TAG5 236 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR2A7Q96R45 310 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RNF114Q9Y508 228 aa11.47□□□□□ -0.57
TNFRSF1A-216ENST00000543995 A0A1B0GUS0 222 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HAX1O00165 279 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FCN1O00602 326 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CA2P00918 260 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 KRASP01116 189 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 IGHG2P01859 326 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 G6PCP35575 357 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 GNB1P62873 340 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TMEM128Q5BJH2 165 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FOXRED2Q8IWF2 684 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ENKURQ8TC29 256 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CREBL2O60519 120 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 KBTBD11O94819 623 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 CNIH1O95406 144 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 TCRBP04435 133 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 CRYGBP07316 175 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 ANXA3P12429 323 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 VAMP1P23763 118 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 DHODHQ02127 395 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 PJVKQ0ZLH3 352 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 AWAT1Q58HT5 328 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 TRAV6A0A075B6T7 132 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 ACTL6BO94805 426 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 UCP1P25874 307 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 TNXAQ16473 311 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 SLC25A42Q86VD7 318 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 MMD2Q8IY49 270 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 PUSL1Q8N0Z8 303 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 GALNT14Q96FL9 552 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
TNFRSF1A-216ENST00000543995 SERTAD4Q9NUC0 356 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms