RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
RTN3-213ENST00000543552 DYRK1AQ13627 763 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 IDO2Q6ZQW0 420 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 OR4S2Q8NH73 311 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 PALMDQ9NP74 551 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 TXNL4BQ9NX01 149 aaKnown RBP10.04□□□□□ -0.8
RTN3-213ENST00000543552 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 DAPK2Q9UIK4 370 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 SSR3Q9UNL2 185 aa10.04□□□□□ -0.8
RTN3-213ENST00000543552 LINC00473A8K010 186 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 FCGR3BO75015 233 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 APELAP0DMC3 54 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 SCAND1P57086 179 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 RHOGP84095 191 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 ATP5G2Q06055 141 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 EXOSC2Q13868 293 aaKnown RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 HAPLN4Q86UW8 402 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 NR2C2APQ86WQ0 139 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 Q8N402 240 aa10.03□□□□□ -0.8
RTN3-213ENST00000543552 HSD17B10Q99714 261 aaKnown RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 YTHDF1Q9BYJ9 559 aaKnown RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
RTN3-213ENST00000543552 IGKV1D-8A0A087WSZ0 117 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 SMIM30A4D0T7 59 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 LYL1P12980 280 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 NFYAP23511 347 aaPredicted RBP10.02□□□□□ -0.81
RTN3-213ENST00000543552 SFXN4Q6P4A7 337 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 SPARTQ8N0X7 666 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 NECAP1Q8NC96 275 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 NUDCD2Q8WVJ2 157 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 RHBDL2Q9NX52 303 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
RTN3-213ENST00000543552 ETV7Q9Y603 341 aa10.02□□□□□ -0.81
RTN3-213ENST00000543552 DPPA5A6NC42 116 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 J3QRK9 145 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 DHFRP00374 187 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 MAS1LP35410 378 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 ARPC4P59998 168 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 DEFA5Q01523 94 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 MRGPRG-AS1Q2M3A8 158 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 ZNF66Q6ZN08 573 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 Q8N1Y9 231 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 LGALS14Q8TCE9 139 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 OR51E2Q9H255 320 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 ELF5Q9UKW6 265 aaPredicted RBP10.01□□□□□ -0.81
RTN3-213ENST00000543552 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
RTN3-213ENST00000543552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
RTN3-213ENST00000543552 A0A0A6YYH2 397 aa10□□□□□ -0.81
RTN3-213ENST00000543552 TRBV9A0A0B4J1U6 114 aa10□□□□□ -0.81
RTN3-213ENST00000543552 A6NJ64 397 aa10□□□□□ -0.81
RTN3-213ENST00000543552 KBTBD11O94819 623 aa10□□□□□ -0.81
RTN3-213ENST00000543552 HRASP01112 189 aa10□□□□□ -0.81
RTN3-213ENST00000543552 TRBV12-3P01733 135 aa10□□□□□ -0.81
RTN3-213ENST00000543552 CSN3P07498 182 aa10□□□□□ -0.81
RTN3-213ENST00000543552 MSMO1Q15800 293 aa10□□□□□ -0.81
RTN3-213ENST00000543552 OR2B11Q5JQS5 317 aa10□□□□□ -0.81
RTN3-213ENST00000543552 IL34Q6ZMJ4 242 aa10□□□□□ -0.81
RTN3-213ENST00000543552 LAX1Q8IWV1 398 aa10□□□□□ -0.81
RTN3-213ENST00000543552 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
RTN3-213ENST00000543552 OR2A7Q96R45 310 aa10□□□□□ -0.81
RTN3-213ENST00000543552 TNCP24821 2201 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 TMEM127O75204 238 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 IFNA6P05013 189 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 RPL27AP46776 148 aaKnown RBP9.99□□□□□ -0.81
RTN3-213ENST00000543552 C15orf32Q32M92 178 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 ZNF773Q6PK81 442 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 TMEM167AQ8TBQ9 72 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 SPATA2Q9UM82 520 aa9.99□□□□□ -0.81
RTN3-213ENST00000543552 IGKV1D-13A0A0B4J2D9 117 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 NPIPB5A8MRT5 1133 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 BMPR1BO00238 502 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 SSX5O60225 188 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 PRH1P02810 166 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 IGKV1-13P0DP09 117 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 SDC2P34741 201 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
RTN3-213ENST00000543552 ZNF45Q02386 682 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
RTN3-213ENST00000543552 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms