RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 Q9Y3F1 56 aa2.78□□□□□ -1.96
SFSWAP-211ENST00000542813 COL11A1P12107 1806 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PARP14Q460N5 1801 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 LOC400499M0QZD8 3231 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PCNX3Q9H6A9 2034 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 ERI2A8K979 691 aaKnown RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 DISC1C4P0D8 188 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 INMT-MINDY4F8WBC2 141 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 CXCR6O00574 342 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PSPHP1O15172 72 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 FGF16O43320 207 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TRAF3IP2O43734 574 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 OR1I1O60431 355 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 RP2O75695 350 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TRBV12-3P01733 135 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 MT-ND4LP03901 98 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 C8GP07360 202 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 GABRA1P14867 456 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 CXCL3P19876 107 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TCN2P20062 427 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SSTR5P35346 364 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 IFNGR2P38484 337 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 CD200P41217 278 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 NMUP48645 174 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TTPAP49638 278 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 EVX1P49640 407 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PPOXP50336 477 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 KLF3P57682 345 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 LSM6P62312 80 aaKnown RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 IGLV3-21P80748 117 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 LAMTOR4Q0VGL1 99 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SKP2Q13309 424 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PAFAH1B3Q15102 231 aaKnown RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 RSPO1Q2MKA7 263 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC36A2Q495M3 483 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 GFI1BQ5VTD9 330 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 DRAM2Q6UX65 266 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 FAM131AQ6UXB0 335 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 LRRC28Q86X40 367 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 ACBD7Q8N6N7 88 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 OR8J3Q8NGG0 315 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 OR52E4Q8NGH9 312 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TERB2Q8NHR7 220 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 PIFOQ8TCI5 191 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 ABHD3Q8WU67 409 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM159Q96B96 161 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 MRAP2Q96G30 205 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SMARCD1Q96GM5 515 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM56Q96MV1 263 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TIMM17AQ99595 171 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM243Q9BU79 118 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC25A39Q9BZJ4 359 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 EXOSC4Q9NPD3 245 aaKnown RBP2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM138Q9NPI0 162 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 LHX9Q9NQ69 397 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 SMCO4Q9NRQ5 59 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 IL17CQ9P0M4 197 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 RAB22AQ9UL26 194 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 DENND4AQ7Z401 1863 aa2.77□□□□□ -1.97
SFSWAP-211ENST00000542813 TRIP11Q15643 1979 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 PIEZO2Q9H5I5 2752 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 C5orf58C9J3I9 102 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF670-ZNF695F2Z2N8 137 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 RPL36A-HNRNPH2H7BZ11 118 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 GNGT2O14610 69 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 LYRM1O43325 122 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 HCRTO43612 131 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CDRT1O95170 752 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 VAMP5O95183 116 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CYB5R3P00387 301 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SERPINA1P01009 418 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 IGF2P01344 180 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 IFNA21P01568 189 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 BCHEP06276 602 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CD2P06729 351 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 TSPAN19P0C672 248 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SULT1A3P0DMM9 295 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SULT1A4P0DMN0 295 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 C1GALT1C1LP0DN25 315 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SCGB1A1P11684 91 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 UGT2B7P16662 529 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF14P17017 642 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 IL1RNP18510 177 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CXCL2P19875 107 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 GATA2P23769 480 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 APLNRP35414 380 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 GABRA4P48169 554 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 PSMB2P49721 201 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DLX6P56179 175 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CAV3P56539 151 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CDC42P60953 191 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 EIF5AP63241 154 aaKnown RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ARG2P78540 354 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DAZ2Q13117 558 aaKnown RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ERCC8Q13216 396 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 RSU1Q15404 277 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SURF2Q15527 256 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 GUK1Q16774 197 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms