RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 LYZL6O75951 148 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 TFF1P04155 84 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 IGHV3-43DP0DP04 118 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 NDUFB7P17568 137 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 EGR1P18146 543 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 UBE2G2P60604 165 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 RPP30P78346 268 aaKnown RBP10.23□□□□□ -0.77
NPC1-202ENST00000540608 HTD2P86397 168 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 WDR82Q6UXN9 313 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 RFESDQ8TAC1 157 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 TRAPPC1Q9Y5R8 145 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 ZNF320A2RRD8 509 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 DEFB108AA8MXU0 73 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
NPC1-202ENST00000540608 ADH4P08319 380 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 OPRK1P41145 380 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 EDDM3BP56851 147 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
NPC1-202ENST00000540608 TPRX1Q8N7U7 411 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 FER1L6-AS2Q96M78 137 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 PXMP4Q9Y6I8 212 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 URB1O60287 2271 aaKnown RBP10.22□□□□□ -0.77
NPC1-202ENST00000540608 SPENQ96T58 3664 aaKnown RBP10.22□□□□□ -0.77
NPC1-202ENST00000540608 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 C15orf65H3BRN8 121 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 SPINT2O43291 252 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 SPCS3P61009 180 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 HES3Q5TGS1 186 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 AURKAIP1Q9NWT8 199 aaPredicted RBP10.22□□□□□ -0.77
NPC1-202ENST00000540608 TP53TG5Q9Y2B4 290 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
NPC1-202ENST00000540608 HPRT1P00492 218 aa10.21□□□□□ -0.77
NPC1-202ENST00000540608 DUTP33316 252 aaKnown RBP10.21□□□□□ -0.77
NPC1-202ENST00000540608 PRAMEF6Q5VXH4 476 aa10.21□□□□□ -0.77
NPC1-202ENST00000540608 TRAT1Q6PIZ9 186 aa10.21□□□□□ -0.77
NPC1-202ENST00000540608 TMPRSS7Q7RTY8 843 aa10.21□□□□□ -0.77
NPC1-202ENST00000540608 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
NPC1-202ENST00000540608 C1QTNF9P0C862 333 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 TMPRSS3P57727 454 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 PAX5Q02548 391 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 TRIP6Q15654 476 aaKnown RBP10.21□□□□□ -0.78
NPC1-202ENST00000540608 SSX2Q16385 188 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 SMIM21Q3B7S5 101 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 TREML4Q6UXN2 200 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 ZNF114Q8NC26 417 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 OR52E5Q8NH55 327 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 SFRP2Q96HF1 295 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 ZDHHC11Q9H8X9 412 aa10.21□□□□□ -0.78
NPC1-202ENST00000540608 PATZ1Q9HBE1 687 aaKnown RBP10.21□□□□□ -0.78
NPC1-202ENST00000540608 FCGR3BO75015 233 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 PROP1O75360 226 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 BMP5P22003 454 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 GPR12P47775 334 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 SOX8P57073 446 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 DMRTC2Q8IXT2 367 aaPredicted RBP10.2□□□□□ -0.78
NPC1-202ENST00000540608 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 ELOVL5Q9NYP7 299 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 CXorf1O96002 111 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 IGKV3-15P01624 115 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
NPC1-202ENST00000540608 OR4A8P0C604 315 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 STAG3L2P0CL84 134 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 STAG3L3P0CL85 134 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 VDAC2P45880 294 aaPredicted RBP10.2□□□□□ -0.78
NPC1-202ENST00000540608 ARG2P78540 354 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
NPC1-202ENST00000540608 Q6ZT83 130 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 SGMS2Q8NHU3 365 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 CHODLQ9H9P2 273 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 PRSS46E5RG02 174 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 RRHO14718 337 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPC1-202ENST00000540608 TIMM8AO60220 97 aaPredicted RBP10.2□□□□□ -0.78
NPC1-202ENST00000540608 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 KITLGP21583 273 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 PRAMEF5Q5TYX0 476 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 GCNT2Q8N0V5 402 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 MGST2Q99735 147 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 TUBG2Q9NRH3 451 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 FKBP11Q9NYL4 201 aa10.2□□□□□ -0.78
NPC1-202ENST00000540608 CACNA1DQ01668 2161 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 PTPRBP23467 1997 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 MDFIC2A0A1B0GVS7 189 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 PGPEP1LA6NFU8 196 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 AGFG2O95081 481 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 USF2Q15853 346 aaPredicted RBP10.19□□□□□ -0.78
NPC1-202ENST00000540608 FAM214BQ7L5A3 538 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 FAM216AQ8WUB2 273 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
NPC1-202ENST00000540608 DSPP15924 2871 aaKnown RBP10.19□□□□□ -0.78
NPC1-202ENST00000540608 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms