RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 UHRF2Q96PU4 802 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 SLC35D1Q9NTN3 355 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 TMEM210A6NLX4 147 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 LINC00473A8K010 186 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 C1QTNF9BB2RNN3 333 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 F6UZH7 168 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 COX7A1P24310 79 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 ZNF585BQ52M93 769 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 SNRNP40Q96DI7 357 aaKnown RBP8.28□□□□□ -1.08
PHC1-208ENST00000540574 FAM103A1Q9BTL3 118 aaKnown RBP8.28□□□□□ -1.08
PHC1-208ENST00000540574 CPAMD8Q8IZJ3 1885 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 PAX9P55771 341 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 NEIL1Q96FI4 390 aaPredicted RBP8.28□□□□□ -1.08
PHC1-208ENST00000540574 PARLQ9H300 379 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 CALYQ9NYX4 217 aa8.28□□□□□ -1.08
PHC1-208ENST00000540574 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 IGHV1-18A0A0C4DH31 117 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
PHC1-208ENST00000540574 MBP02144 154 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 HES1Q14469 280 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 COQ2Q96H96 371 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 DCAF16Q9NXF7 216 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 CTXND1A0A1B0GTU2 59 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 NKX6-3A6NJ46 265 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 APOA2P02652 100 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 REG1AP05451 166 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 SPSB3Q6PJ21 355 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 DUX4L9Q6RFH8 374 aaPredicted RBP8.27□□□□□ -1.09
PHC1-208ENST00000540574 SPNS3Q6ZMD2 512 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 BAGE3Q86Y29 109 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 BAGE2Q86Y30 109 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 RPP25LQ8N5L8 163 aaKnown RBP8.27□□□□□ -1.09
PHC1-208ENST00000540574 ZNF383Q8NA42 475 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 RNF7Q9UBF6 113 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 MGST3O14880 152 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 CLN5O75503 358 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 OPRK1P41145 380 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 ATP5G3P48201 142 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 RPL31P62899 125 aaKnown RBP8.27□□□□□ -1.09
PHC1-208ENST00000540574 SERF2P84101 59 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 PMS2P11Q13670 270 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 PSG5Q15238 335 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 LHFPL4Q7Z7J7 247 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 SAP30LQ9HAJ7 183 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 OR6C3Q9NZP0 311 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 NAT8Q9UHE5 227 aa8.27□□□□□ -1.09
PHC1-208ENST00000540574 CFAP47Q6ZTR5 3102 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 A8MXE2 369 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 IQCF6A8MYZ5 107 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 OR9G9P0C7N8 305 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 TDGF1P13385 188 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 NPY1RP25929 384 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 RTL8BQ17RB0 113 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 TMEM108Q6UXF1 575 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 NHLRC2Q8NBF2 726 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 OR4S2Q8NH73 311 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 BLNKQ8WV28 456 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 ELOVL1Q9BW60 279 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 PXMP4Q9Y6I8 212 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 H3BTX0 84 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 J3QR06 171 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 LRRC75BQ2VPJ9 315 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 PRR31Q5SQ13 230 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 CD177Q8N6Q3 437 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
PHC1-208ENST00000540574 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 ADH4P08319 380 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 CCL3L1P16619 93 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 Q6ZR03 302 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 HARBI1Q96MB7 349 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 EGLN1Q9GZT9 426 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 ZDHHC11Q9H8X9 412 aa8.26□□□□□ -1.09
PHC1-208ENST00000540574 TSTD3H0UI37 97 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 RRHO14718 337 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 SLC31A2O15432 143 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 ARL14EPLP0DKL9 152 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 ORM2P19652 201 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 NTF3P20783 257 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 CHRNB4P30926 498 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 DLX1P56177 255 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 MOB3BQ86TA1 216 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 OR10A7Q8NGE5 316 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 IL22RA2Q969J5 263 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 NPCDR1Q9BY65 106 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 PARD6AQ9NPB6 346 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 AHRRA9YTQ3 701 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 CNIH1O95406 144 aa8.25□□□□□ -1.09
PHC1-208ENST00000540574 SLC35E4Q6ICL7 350 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms