RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ACTL6BO94805 426 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 PPYP01298 95 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 IGHV3-11P01762 117 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 FCGR2CP31995 323 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 TGFBR1P36897 503 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 LSM3P62310 102 aaKnown RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 RPL30P62888 115 aaKnown RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 TNXAQ16473 311 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 DEFB121Q5J5C9 76 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 TMEM69Q5SWH9 247 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 MMD2Q8IY49 270 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 SAMD12Q8N8I0 201 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 OR5T1Q8NG75 326 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 OR5AP2Q8NGF4 316 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 SNAPC3Q92966 411 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 DLX4Q92988 240 aaPredicted RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 BORCS5Q969J3 196 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 PHB2Q99623 299 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 SPIN2AQ99865 258 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 B9D2Q9BPU9 175 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 SPIN2BQ9BPZ2 258 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 DCUN1D5Q9BTE7 237 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 TINAGL1Q9GZM7 467 aaPredicted RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 ZNF430Q9H8G1 570 aaPredicted RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 IFT46Q9NQC8 304 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 ZNF256Q9Y2P7 627 aaPredicted RBP8.92□□□□□ -0.98
RTN3-209ENST00000538995 DNAH9Q9NYC9 4486 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 MSGN1A6NI15 193 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 RBFOX2O43251 390 aaKnown RBP eCLIP8.91□□□□□ -0.98
RTN3-209ENST00000538995 OR9G9P0C7N8 305 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 ZP3P21754 424 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 ECI1P42126 302 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 SLURP1P55000 103 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 TAS2R20P59543 309 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 IDO2Q6ZQW0 420 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 MFSD4AQ8N468 514 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 ADAD2Q8NCV1 583 aaKnown RBP8.91□□□□□ -0.98
RTN3-209ENST00000538995 SECTM1Q8WVN6 248 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 GIMAP1Q8WWP7 306 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 ACOT12Q8WYK0 555 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 CMTM3Q96MX0 182 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 AIFM2Q9BRQ8 373 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 FUNDC2Q9BWH2 189 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 RANGRFQ9HD47 186 aaPredicted RBP8.91□□□□□ -0.98
RTN3-209ENST00000538995 TAS2R8Q9NYW2 309 aa8.91□□□□□ -0.98
RTN3-209ENST00000538995 FAM223BA6NKX1 122 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 MPPED1O15442 326 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 SAP30O75446 220 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 KBTBD11O94819 623 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 OR2A4O95047 310 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 HRASP01112 189 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 PTHLHP12272 177 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 NAT1P18440 290 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 MAS1LP35410 378 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 TAS2R46P59540 309 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 NCS1P62166 190 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 CD69Q07108 199 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 CATR1Q13166 79 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 OR2B11Q5JQS5 317 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 SLC25A42Q86VD7 318 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 FAM223AQ8IWN6 122 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 PUSL1Q8N0Z8 303 aaKnown RBP8.9□□□□□ -0.98
RTN3-209ENST00000538995 TMEM167AQ8TBQ9 72 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 OR2A7Q96R45 310 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 SLC5A7Q9GZV3 580 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 COA4Q9NYJ1 87 aa8.9□□□□□ -0.98
RTN3-209ENST00000538995 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
RTN3-209ENST00000538995 GABARAPO95166 117 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 APOA1P02647 267 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 FGF2P09038 288 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 PRSS3P35030 304 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 BRWD1-AS2P59051 145 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 HERV-K104P61576 105 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 DYRK1AQ13627 763 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 FAM209BQ5JX69 171 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 ZNF343Q6P1L6 599 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 TTC9CQ8N5M4 171 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 OR6Q1Q8NGQ2 317 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 OR4A5Q8NH83 315 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 CD300LFQ8TDQ1 290 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 PRR25Q96S07 402 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 ELOVL1Q9BW60 279 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 SCPEP1Q9HB40 452 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 CCL28Q9NRJ3 127 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 EHFQ9NZC4 300 aa8.89□□□□□ -0.99
RTN3-209ENST00000538995 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TNCP24821 2201 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TRBV9A0A0B4J1U6 114 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 SMIM31A0A1B0GVY4 71 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 MEIS3P1A6NDR6 274 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 NPIPB5A8MRT5 1133 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TNFSF12O43508 249 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 SMIM18P0DKX4 95 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TAS2R31P59538 309 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 FXYD4P59646 89 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 VBP1P61758 197 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms