RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 ZNF430Q9H8G1 570 aaPredicted RBP10.63□□□□□ -0.71
SYNE1-235ENST00000537033 RAB26Q9ULW5 256 aa10.63□□□□□ -0.71
SYNE1-235ENST00000537033 RRP15Q9Y3B9 282 aaKnown RBP10.63□□□□□ -0.71
SYNE1-235ENST00000537033 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
SYNE1-235ENST00000537033 IGKV1D-8A0A087WSZ0 117 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 SMIM30A4D0T7 59 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 NOTOA8MTQ0 251 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 J3QRK9 145 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 AIREO43918 545 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 MRPS14O60783 128 aaKnown RBP10.62□□□□□ -0.71
SYNE1-235ENST00000537033 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 SAA1P0DJI8 122 aaPredicted RBP10.62□□□□□ -0.71
SYNE1-235ENST00000537033 GNG2P59768 71 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 FAM209BQ5JX69 171 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 SPATA25Q9BR10 227 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 TUBA4BQ9H853 241 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 SIGLEC8Q9NYZ4 499 aa10.62□□□□□ -0.71
SYNE1-235ENST00000537033 CSN3P07498 182 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 NFYAP23511 347 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-235ENST00000537033 PSMB9P28065 219 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 MRGPRG-AS1Q2M3A8 158 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 CNIH2Q6PI25 160 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 IL34Q6ZMJ4 242 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 SLC25A42Q86VD7 318 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 NR2C2APQ86WQ0 139 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 OR2K2Q8NGT1 345 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 OR4S2Q8NH73 311 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 VSTM2AQ8TAG5 236 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 FCGR1BQ92637 280 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 HSD17B10Q99714 261 aaKnown RBP10.61□□□□□ -0.71
SYNE1-235ENST00000537033 AKIP1Q9NQ31 210 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 ADAM30Q9UKF2 790 aa10.61□□□□□ -0.71
SYNE1-235ENST00000537033 ELF5Q9UKW6 265 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-235ENST00000537033 RBMX2Q9Y388 322 aaKnown RBP10.61□□□□□ -0.71
SYNE1-235ENST00000537033 DPPA5A6NC42 116 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 TMEM235A6NFC5 223 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 HLA-DQB1P01920 261 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 PRH1P02810 166 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 FGF9P31371 208 aaPredicted RBP10.6□□□□□ -0.71
SYNE1-235ENST00000537033 UBE2UQ5VVX9 321 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 TPRA1Q86W33 373 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 DYNLRB2Q8TF09 96 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
SYNE1-235ENST00000537033 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 ANXA10Q9UJ72 324 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 ZNF257Q9Y2Q1 563 aa10.6□□□□□ -0.71
SYNE1-235ENST00000537033 TRBV9A0A0B4J1U6 114 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 BMPR1BO00238 502 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
SYNE1-235ENST00000537033 IFNA6P05013 189 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 ZNF45Q02386 682 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 C15orf32Q32M92 178 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 C10orf55Q5SWW7 151 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 SFXN4Q6P4A7 337 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 TTC9CQ8N5M4 171 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 LGALS14Q8TCE9 139 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
SYNE1-235ENST00000537033 OR51E2Q9H255 320 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 Q9H521 79 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 SSR3Q9UNL2 185 aa10.59□□□□□ -0.71
SYNE1-235ENST00000537033 TNCP24821 2201 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
SYNE1-235ENST00000537033 OR2J3O76001 311 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 KBTBD11O94819 623 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 DHFRP00374 187 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 MAS1LP35410 378 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 ARPC4P59998 168 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 HAGHQ16775 308 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 ZFAND6Q6FIF0 208 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 LAX1Q8IWV1 398 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 SPARTQ8N0X7 666 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 FYTTD1Q96QD9 318 aaKnown RBP10.58□□□□□ -0.72
SYNE1-235ENST00000537033 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 RHBDL2Q9NX52 303 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 TAS2R8Q9NYW2 309 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 SPATA2Q9UM82 520 aa10.58□□□□□ -0.72
SYNE1-235ENST00000537033 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 NPIPB5A8MRT5 1133 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 TPPPO94811 219 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 HRASP01112 189 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 KIR2DS2P43631 304 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 RPL27AP46776 148 aaKnown RBP10.57□□□□□ -0.72
SYNE1-235ENST00000537033 CD81P60033 236 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
SYNE1-235ENST00000537033 ZNF66Q6ZN08 573 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 AIFM2Q9BRQ8 373 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 THAP7Q9BT49 309 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-235ENST00000537033 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
SYNE1-235ENST00000537033 RYR3Q15413 4870 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms