RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KCTD9Q7L273 389 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 HAPLN4Q86UW8 402 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 ADAD2Q8NCV1 583 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 LGALS14Q8TCE9 139 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 RBMX2Q9Y388 322 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 HLA-DQB1P01920 261 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 SAA1P0DJI8 122 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 SDC2P34741 201 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 DYRK1AQ13627 763 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 CDK10Q15131 360 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 RHBDL2Q9NX52 303 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 ANXA10Q9UJ72 324 aa12.39□□□□□ -0.43
CLSTN3-204ENST00000535313 A0A087WXM4 84 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 RPEL1Q2QD12 228 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 OR51E2Q9H255 320 aa12.38□□□□□ -0.43
CLSTN3-204ENST00000535313 IGKV1D-13A0A0B4J2D9 117 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 H0Y980 276 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 SSX5O60225 188 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 IGKV1-13P0DP09 117 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 SCAND1P57086 179 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 RHOGP84095 191 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 MXD1Q05195 221 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
CLSTN3-204ENST00000535313 RYR3Q15413 4870 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 LOC100506127A0A0U1RQW1 187 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 IGLV2-14P01704 120 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 ARPC4P59998 168 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 RPL30P62888 115 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 ATP5G2Q06055 141 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 IDNKQ5T6J7 187 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 SLC25A42Q86VD7 318 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 YIPF6Q96EC8 236 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 AKIP1Q9NQ31 210 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 SPATA2Q9UM82 520 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 ETV7Q9Y603 341 aa12.36□□□□□ -0.43
CLSTN3-204ENST00000535313 TRAV18A0A075B6X5 111 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 RBMXL2O75526 392 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 OR2A4O95047 310 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 PRH1P02810 166 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 CLEC2LP0C7M8 214 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 IL34Q6ZMJ4 242 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 VKORC1L1Q8N0U8 176 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 Q8N1Y9 231 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 NECAP1Q8NC96 275 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 BEST4Q8NFU0 473 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 OR2A7Q96R45 310 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 RNF167Q9H6Y7 350 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 ADAM30Q9UKF2 790 aa12.35□□□□□ -0.43
CLSTN3-204ENST00000535313 A0A0A6YYH2 397 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 TRBV9A0A0B4J1U6 114 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 DPPA5A6NC42 116 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 A6NJ64 397 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 ALDH3B2P48448 385 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 FAM209BQ5JX69 171 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 LCN12Q6JVE5 192 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 ZNF66Q6ZN08 573 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 MFSD4AQ8N468 514 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 SIGLEC8Q9NYZ4 499 aa12.34□□□□□ -0.43
CLSTN3-204ENST00000535313 A8MZ25 164 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 AIREO43918 545 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 KBTBD11O94819 623 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 HRASP01112 189 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 CSN3P07498 182 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 FCGR2CP31995 323 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 MAS1LP35410 378 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 TGFBR1P36897 503 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 ZNF45Q02386 682 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 Q8N402 240 aa12.33□□□□□ -0.44
CLSTN3-204ENST00000535313 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms