RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SLC25A38Q96DW6 304 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 YIPF6Q96EC8 236 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 ALX4Q9H161 411 aaPredicted RBP6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 TMEM140Q9NV12 185 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 ETV7Q9Y603 341 aa6.96□□□□□ -1.3
CCDC90B-219ENST00000534753 FCGR3BO75015 233 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 DUS4LO95620 317 aaKnown RBP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 CTXN2P0C2S0 81 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 CD40LGP29965 261 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 SLC6A1P30531 599 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 TPPP2P59282 170 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 KRTAP10-11P60412 298 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 VBP1P61758 197 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 SRSF7Q16629 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 CNIH2Q6PI25 160 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 IDO2Q6ZQW0 420 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 SAMD12Q8N8I0 201 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 ZNF491Q8N8L2 437 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 BEST4Q8NFU0 473 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 OR5M8Q8NGP6 311 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 OR1N2Q8NGR9 330 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 SECTM1Q8WVN6 248 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 ARPC1AQ92747 370 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 S100A16Q96FQ6 103 aaKnown RBP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 P2RX4Q99571 388 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 PHB2Q99623 299 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 RNF5Q99942 180 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 MCRIP2Q9BUT9 160 aaKnown RBP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 TOLLIPQ9H0E2 274 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 DCSTAMPQ9H295 470 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 IFT46Q9NQC8 304 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.95□□□□□ -1.33e-11■■■■■ 43.7
CCDC90B-219ENST00000534753 ANXA10Q9UJ72 324 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 SPATA2Q9UM82 520 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 VSIG4Q9Y279 399 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 OR2W1Q9Y3N9 320 aa6.95□□□□□ -1.3
CCDC90B-219ENST00000534753 TGP01266 2768 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 IGKV1D-13A0A0B4J2D9 117 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 LINC00473A8K010 186 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 SEC14L6B5MCN3 397 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 ARPC1BO15143 372 aaKnown RBP6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 MPPED1O15442 326 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 TNFSF12O43508 249 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 SOX15O60248 233 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 SPDEFO95238 335 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 IGLV2-23P01705 113 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 TRGV3P03979 118 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 IGKV1-13P0DP09 117 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 RRASP10301 218 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 EGR2P11161 476 aaPredicted RBP6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 FCGR2CP31995 323 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 DUTP33316 252 aaKnown RBP6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 LGALS7P47929 136 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 FXYD4P59646 89 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 NCS1P62166 190 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 TNXAQ16473 311 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 VMA21Q3ZAQ7 101 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 UBE2NLQ5JXB2 153 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 Q6ZS49 121 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 KCTD9Q7L273 389 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 CROCCP3Q8IVE0 287 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 ZNF645Q8N7E2 425 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 MINDY2Q8NBR6 621 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 TCTEX1D2Q8WW35 142 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 ACOT12Q8WYK0 555 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 ADTRPQ96IZ2 230 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 UBE2E2Q96LR5 201 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 FUNDC2Q9BWH2 189 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 GPR61Q9BZJ8 451 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 TAS2R8Q9NYW2 309 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 COMMD3Q9UBI1 195 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 MRPS7Q9Y2R9 242 aaKnown RBP6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 NUBP2Q9Y5Y2 271 aa6.94□□□□□ -1.3
CCDC90B-219ENST00000534753 WI2-2373I1.2A0A1W2PRP0 233 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 SRRM4A7MD48 611 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 DIRAS3O95661 229 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 HLA-DQB1P01920 261 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 AADACP22760 399 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 DEFA5Q01523 94 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 ZNF616Q08AN1 781 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 TMEM69Q5SWH9 247 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 HOGA1Q86XE5 327 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 VKORC1L1Q8N0U8 176 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 CCL28Q9NRJ3 127 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 ZNF580Q9UK33 172 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 RBMX2Q9Y388 322 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 PRELID3BQ9Y3B1 194 aa6.93□□□□□ -1.3
CCDC90B-219ENST00000534753 A0A0A6YYH2 397 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms