RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 LILRA1O75019 489 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 HYPMO75409 117 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 KBTBD11O94819 623 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 HSPE1P61604 102 aaKnown RBP6.67□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF79Q15937 498 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 LINC01356Q8N9X3 169 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 OR4B1Q8NGF8 309 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 FAM216AQ8WUB2 273 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 SLX1AQ9BQ83 275 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 RBKSQ9H477 322 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 IGKV1-9A0A0C4DH69 117 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 RAG2P55895 527 aa6.67□□□□□ -1.34
CTNND1-230ENST00000532245 IGHV3-49A0A0A0MS15 119 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 BMPR1BO00238 502 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 MFNGO00587 321 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 SIGLEC5O15389 551 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 FCGR2BP31994 310 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-230ENST00000532245 EWSR1Q01844 656 aaKnown RBP eCLIP6.66□□□□□ -1.34
CTNND1-230ENST00000532245 PAX5Q02548 391 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF273Q14593 569 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ANKRD55Q3KP44 614 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 TMEM41BQ5BJD5 291 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 TCTEX1D1Q8N7M0 179 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 CD1BP29016 333 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 MIDNQ504T8 468 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 TMEM219Q86XT9 240 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ARPC1AQ92747 370 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 GPR146Q96CH1 333 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 MARVELD1Q9BSK0 173 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 PPP1R3EQ9H7J1 279 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF207O43670 478 aaKnown RBP6.66□□□□□ -1.34
CTNND1-230ENST00000532245 HLA-GP17693 338 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 BAGE3Q86Y29 109 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 BAGE2Q86Y30 109 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ELOVL1Q9BW60 279 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ADAMTS9Q9P2N4 1935 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF737O75373 536 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 HGFACQ04756 655 aa6.66□□□□□ -1.34
CTNND1-230ENST00000532245 MRPL30Q8TCC3 161 aaKnown RBP6.66□□□□□ -1.34
CTNND1-230ENST00000532245 WDR61Q9GZS3 305 aaKnown RBP6.66□□□□□ -1.34
CTNND1-230ENST00000532245 DUXBA0A1W2PPF3 345 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 TCRBV4S1A1TA0A5B7 111 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 C5orf63A6NC05 138 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 IGKV3-15P01624 115 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 GSX2Q9BZM3 304 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 GPR132Q9UNW8 380 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 NOTCH2Q04721 2471 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 MYPOPQ86VE0 399 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 FBXL7Q9UJT9 491 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 TCF19Q9Y242 345 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 IGHV3-66A0A0C4DH42 116 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF705FA8MVS1 300 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 SRRM5B3KS81 715 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 TIMM23O14925 209 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 PLA2G10O15496 165 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 LINC00869P0C866 280 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF705DP0CH99 300 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 ZNF705BP0CI00 300 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 EGR1P18146 543 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 GNG4P50150 75 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 RANP62826 216 aaKnown RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 SELENOHQ8IZQ5 122 aaKnown RBP6.65□□□□□ -1.34
CTNND1-230ENST00000532245 CXorf58Q96LI9 332 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 TM2D1Q9BX74 207 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 NPVFQ9HCQ7 196 aa6.65□□□□□ -1.34
CTNND1-230ENST00000532245 HELZP42694 1942 aaKnown RBP6.65□□□□□ -1.35
CTNND1-230ENST00000532245 MPDZO75970 2070 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 IGHV3OR16-8A0A075B7F1 116 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 ZNF705GA8MUZ8 300 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-230ENST00000532245 CEACAM4O75871 244 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 ORM1P02763 201 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-230ENST00000532245 HIST1H1EP10412 219 aaKnown RBP6.65□□□□□ -1.35
CTNND1-230ENST00000532245 C8orf46Q8TAG6 207 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM167BQ9NRX6 74 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 TRAV24A0A0B4J272 114 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 PLXNA2O75051 1894 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 OR52M1Q8NGK5 317 aa6.65□□□□□ -1.35
CTNND1-230ENST00000532245 HEATR1Q9H583 2144 aaKnown RBP6.65□□□□□ -1.35
CTNND1-230ENST00000532245 FER1L5A0AVI2 2057 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 A0A0G2JLM5 398 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 MELTFP08582 738 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 RELQ04864 619 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM200BQ69YZ2 307 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 LYPD2Q6UXB3 125 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 TXN2Q99757 166 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 KPTNQ9Y664 436 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 C17orf98A8MV24 154 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 NBR2O15453 112 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 NPPCP23582 126 aa6.64□□□□□ -1.35
CTNND1-230ENST00000532245 RPS11P62280 158 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTNND1-230ENST00000532245 LRRC75BQ2VPJ9 315 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms