RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ETV6P41212 452 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 CDX1P47902 265 aaPredicted RBP9.78□□□□□ -0.84
SMCO4-202ENST00000525141 TAS2R19P59542 299 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 FXYD4P59646 89 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 RPS16P62249 146 aaKnown RBP9.78□□□□□ -0.84
SMCO4-202ENST00000525141 SLC35B1P78383 322 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 FOXE3Q13461 319 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 RNASE12Q5GAN4 147 aaKnown RBP9.78□□□□□ -0.84
SMCO4-202ENST00000525141 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
SMCO4-202ENST00000525141 LIN54Q6MZP7 749 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 LPCAT3Q6P1A2 487 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 CCDC190Q86UF4 302 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 TMEM17Q86X19 198 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 MFSD4AQ8N468 514 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 ARRDC1Q8N5I2 433 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 BVESQ8NE79 360 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 KLHL30-AS1Q8NEE0 82 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
SMCO4-202ENST00000525141 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 CCL24O00175 119 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 FCN1O00602 326 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 IFNA6P05013 189 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 ELANEP08246 267 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 EGR2P11161 476 aaPredicted RBP9.77□□□□□ -0.85
SMCO4-202ENST00000525141 PSMB8P28062 276 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 UCP3P55916 312 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 RPL30P62888 115 aaKnown RBP9.77□□□□□ -0.85
SMCO4-202ENST00000525141 PSG5Q15238 335 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 DEFB136Q30KP8 78 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 KCTD9Q7L273 389 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 OR6Q1Q8NGQ2 317 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 OSR1Q8TAX0 266 aaPredicted RBP9.77□□□□□ -0.85
SMCO4-202ENST00000525141 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 WSB1Q9Y6I7 421 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 V9GYH0 126 aa9.77□□□□□ -0.85
SMCO4-202ENST00000525141 M0QYG6 137 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
SMCO4-202ENST00000525141 RAB3DO95716 219 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 SLC6A1P30531 599 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 C19orf54Q5BKX5 351 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 SPANXN2Q5MJ10 180 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF818PQ6ZRF7 136 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 THAP7Q9BT49 309 aaPredicted RBP9.76□□□□□ -0.85
SMCO4-202ENST00000525141 GON7Q9BXV9 100 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 TINAGL1Q9GZM7 467 aaPredicted RBP9.76□□□□□ -0.85
SMCO4-202ENST00000525141 FBXL15Q9H469 300 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 FBXO7Q9Y3I1 522 aa9.76□□□□□ -0.85
SMCO4-202ENST00000525141 ANKRD20A5PA0PJZ0 165 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
SMCO4-202ENST00000525141 NUDT19A8MXV4 375 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 SHOXO15266 292 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMCO4-202ENST00000525141 FCGR3BO75015 233 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 CRYZL1O95825 349 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 IGLV1-40P01703 118 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 CRYGBP07316 175 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 KIR2DS2P43631 304 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 CATR1Q13166 79 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 MEF2DQ14814 521 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 PLGLAQ15195 96 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 DEFB121Q5J5C9 76 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF562Q6V9R5 426 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 LHFPL1Q86WI0 220 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 MINDY2Q8NBR6 621 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 TERB2Q8NHR7 220 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 CD300LFQ8TDQ1 290 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 HARBI1Q96MB7 349 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 RSRP1Q9BUV0 290 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 FXYD6Q9H0Q3 95 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 OR51J1Q9H342 316 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 BATF3Q9NR55 127 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 METTL1Q9UBP6 276 aaKnown RBP9.75□□□□□ -0.85
SMCO4-202ENST00000525141 TNCP24821 2201 aa9.75□□□□□ -0.85
SMCO4-202ENST00000525141 I3L521 148 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 GPR31O00270 319 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 TNFSF12O43508 249 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 SLC25A17O43808 307 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 SOX15O60248 233 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF735P0CB33 412 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 AKAIN1P0CW23 69 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 S100GP29377 79 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 UBE2KP61086 200 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 NDPQ00604 133 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF79Q15937 498 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 PYDC2Q56P42 97 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 CXorf66Q5JRM2 361 aaPredicted RBP9.74□□□□□ -0.85
SMCO4-202ENST00000525141 ASPHD1Q5U4P2 390 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 LINC00299Q6ZSB3 139 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 SLC38A6Q8IZM9 456 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms