RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 NPIPB5A8MRT5 1133 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 H0YJW9 148 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SIRPB1O00241 398 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SSX5O60225 188 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 IGHG4P01861 327 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 APOA2P02652 100 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ARG1P05089 322 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CD5P06127 495 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CRYGCP07315 174 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 P0C879 139 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNF735P0CB33 412 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 MYCNOSP40205 109 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CAMPP49913 170 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 INSL3P51460 131 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 F2RL1P55085 397 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ELLP55199 621 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 GNG2P59768 71 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 RTL8BQ17RB0 113 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PIGYQ3MUY2 71 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SLC22A6Q4U2R8 563 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 AKIRIN2Q53H80 203 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CT45A1Q5HYN5 189 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNF562Q6V9R5 426 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 NOXA1Q86UR1 476 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNF429Q86V71 674 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CCDC71LQ8N9Z2 235 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR51D1Q8NGF3 324 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR10V1Q8NGI7 309 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR13C5Q8NGS8 318 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR10J5Q8NHC4 309 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CT45A3Q8NHU0 189 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LGALS14Q8TCE9 139 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TOMM40LQ969M1 308 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ISOC1Q96CN7 298 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TSC22D3Q99576 134 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PRRT1Q99946 306 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNF702PQ9H963 129 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 AURKAIP1Q9NWT8 199 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 PTTG2Q9NZH5 202 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ONECUT1Q9UBC0 465 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 FAM96BQ9Y3D0 163 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 AK6Q9Y3D8 172 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 CHTOPQ9Y3Y2 248 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 RNF114Q9Y508 228 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PRR14LQ5THK1 2151 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TRAV40A0A0B4J280 105 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM223BA6NKX1 122 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 H3BMQ9 156 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 AP4M1O00189 453 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SOCS1O15524 211 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CYB5BO43169 146 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ANGPTL7O43827 346 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 HPRT1P00492 218 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 HRASP01112 189 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 IGLV1-40P01703 118 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FCER2P06734 321 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 IGHV4-38-2P0DP08 117 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 GYPEP15421 78 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CDK2P24941 298 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SLC35B1P78383 322 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 AESQ08117 197 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TMEM267Q0VDI3 215 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 CARTPTQ16568 116 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TAF9Q16594 264 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ETFRF1Q6IPR1 90 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM223AQ8IWN6 122 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 LAX1Q8IWV1 398 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 PNKDQ8N490 385 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 TTC9CQ8N5M4 171 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OR2AK2Q8NG84 335 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OR4S2Q8NH73 311 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 LHX4Q969G2 390 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 RFT1Q96AA3 541 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 RPEQ96AT9 228 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 ARHGAP5-AS1Q96IT6 56 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SLC6A7Q99884 636 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM110AQ9BQ89 295 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 PPA2Q9H2U2 334 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 HRH4Q9H3N8 390 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 PSG11Q9UQ72 335 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 CCDC160A6NGH7 325 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 DISC1C4P0D8 188 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 H0Y980 276 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 GPR31O00270 319 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 NBR2O15453 112 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 SOX15O60248 233 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 HLA-AP01891 365 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 CRYBA1P05813 215 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 HLA-GP17693 338 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 DUTP33316 252 aaKnown RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 ARF6P62330 175 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 VMA21Q3ZAQ7 101 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 MMD2Q8IY49 270 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 Q8N9W7 124 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 UXS1Q8NBZ7 420 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 OR6Q1Q8NGQ2 317 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FAM110DQ8TAY7 271 aaPredicted RBP2.24□□□□□ -2.05
MCF2-208ENST00000519895 VN1R17PQ8TDU5 208 aa2.24□□□□□ -2.05
MCF2-208ENST00000519895 FCAMRQ8WWV6 532 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms