RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PTTG2Q9NZH5 202 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 RSL24D1Q9UHA3 163 aaKnown RBP8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 ETV7Q9Y603 341 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 TRAV18A0A075B6X5 111 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 C13orf42A0A1B0GVH6 325 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 LINC00473A8K010 186 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 SSX5O60225 188 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 TMEM127O75204 238 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 SAP30O75446 220 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 CRYZL1O95825 349 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 NFYAP23511 347 aaPredicted RBP8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 PRSS8Q16651 343 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 IDNKQ5T6J7 187 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 CLVS1Q8IUQ0 354 aaPredicted RBP8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 OR5H6Q8NGV6 325 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 RNF167Q9H6Y7 350 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 RANGRFQ9HD47 186 aaPredicted RBP8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 ANXA10Q9UJ72 324 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 RBMX2Q9Y388 322 aaKnown RBP8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 PRELID3BQ9Y3B1 194 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 CEPT1Q9Y6K0 416 aa8.14□□□□□ -1.11
PDGFRB-203ENST00000517660 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 MSGN1A6NI15 193 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 A6NJ64 397 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 FCGR3BO75015 233 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 TUSC2O75896 110 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 LY86O95711 162 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 AADACP22760 399 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 MRGPRG-AS1Q2M3A8 158 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 SLC25A38Q96DW6 304 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 OR4C12Q96R67 309 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 PHB2Q99623 299 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 TINAGL1Q9GZM7 467 aaPredicted RBP8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 DIABLOQ9NR28 239 aa8.13□□□□□ -1.11
PDGFRB-203ENST00000517660 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 IGKV1D-13A0A0B4J2D9 117 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 CREBL2O60519 120 aaPredicted RBP8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 ACTL6BO94805 426 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 IGKV1-13P0DP09 117 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 ZP3P21754 424 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 RPL30P62888 115 aaKnown RBP8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 CDK10Q15131 360 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 TNXAQ16473 311 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 TIMM50Q3ZCQ8 353 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 HOGA1Q86XE5 327 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 CROCCP3Q8IVE0 287 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 OR6Q1Q8NGQ2 317 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 HSD17B10Q99714 261 aaKnown RBP8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 AUNIPQ9H7T9 357 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 COA4Q9NYJ1 87 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 SPATA2Q9UM82 520 aa8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
PDGFRB-203ENST00000517660 ANKRD34BA5PLL1 514 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ZNF701M0R085 212 aaPredicted RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 MPPED1O15442 326 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 IGLV2-14P01704 120 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 OR9G9P0C7N8 305 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SPNP16150 400 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 FCGR2CP31995 323 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ARPC4P59998 168 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 KLF5Q13887 457 aaPredicted RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 MSMO1Q15800 293 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ZNF66Q6ZN08 573 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 IDO2Q6ZQW0 420 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 KCTD9Q7L273 389 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 OVCH2Q7RTZ1 564 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 GVQW1Q8N7I0 195 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ADAD2Q8NCV1 583 aaKnown RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SRSF12Q8WXF0 261 aaKnown RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ACOT12Q8WYK0 555 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SPIN2AQ99865 258 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SPIN2BQ9BPZ2 258 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 ZNF430Q9H8G1 570 aaPredicted RBP8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
PDGFRB-203ENST00000517660 SORL1Q92673 2214 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 AIREO43918 545 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 APELAP0DMC3 54 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 GP9P14770 177 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 CBX5P45973 191 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 EIF4EBP1Q13541 118 aaPredicted RBP8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 DYRK1AQ13627 763 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 TATDN3Q17R31 274 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 OR2B11Q5JQS5 317 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 GPR107Q5VW38 600 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 ZNF343Q6P1L6 599 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 ADAMTSL5Q6ZMM2 481 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 TTC9CQ8N5M4 171 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 ZBTB34Q8NCN2 500 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 OR13F1Q8NGS4 319 aa8.1□□□□□ -1.11
PDGFRB-203ENST00000517660 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms