RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 COMMD1Q8N668 190 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
USP46-209ENST00000514536 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 ARPC1BO15143 372 aaKnown RBP10.94□□□□□ -0.66
USP46-209ENST00000514536 RAMP3O60896 148 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 CNIH1O95406 144 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 SAA1P0DJI8 122 aaPredicted RBP10.94□□□□□ -0.66
USP46-209ENST00000514536 UCP3P55916 312 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 MRGPRG-AS1Q2M3A8 158 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 PHLDA2Q53GA4 152 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 PYDC2Q56P42 97 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 ARRDC1Q8N5I2 433 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 RSRP1Q9BUV0 290 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 NUBP2Q9Y5Y2 271 aa10.94□□□□□ -0.66
USP46-209ENST00000514536 TET2Q6N021 2002 aaPredicted RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 IGHG4P01861 327 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 RLN1P04808 185 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 ZNF735P0CB33 412 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 PGAM2P15259 253 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 SSBP2P81877 361 aaPredicted RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 TMEM267Q0VDI3 215 aaPredicted RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 FOXE3Q13461 319 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 PRSS8Q16651 343 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 SCGB2B2Q4G0G5 96 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 CXorf66Q5JRM2 361 aaPredicted RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 FAAP20Q6NZ36 180 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 UNQ5815/PRO19632Q6UWF5 114 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 LHFPL1Q86WI0 220 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 POC5Q8NA72 575 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 GRPEL2Q8TAA5 225 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 ARPC1AQ92747 370 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 R3HDM4Q96D70 268 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 THAP7Q9BT49 309 aaPredicted RBP10.93□□□□□ -0.66
USP46-209ENST00000514536 V9GYH0 126 aa10.93□□□□□ -0.66
USP46-209ENST00000514536 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP46-209ENST00000514536 HRASP01112 189 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 RPLP1P05386 114 aaKnown RBP10.92□□□□□ -0.66
USP46-209ENST00000514536 ELANEP08246 267 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 AKAIN1P0CW23 69 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
USP46-209ENST00000514536 RPL23AP62750 156 aaKnown RBP10.92□□□□□ -0.66
USP46-209ENST00000514536 MEF2DQ14814 521 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 SSX9Q7RTT3 188 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 SLC38A6Q8IZM9 456 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 MINDY2Q8NBR6 621 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 TERB2Q8NHR7 220 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 RHOVQ96L33 236 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 ZFP57Q9NU63 452 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 PLXNB1O43157 2135 aa10.92□□□□□ -0.66
USP46-209ENST00000514536 A0A1W2PN81 502 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 ANKRD20A5PA0PJZ0 165 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 OR2A4O95047 310 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 HPRT1P00492 218 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 F2RP25116 425 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 S100GP29377 79 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 CHRNA7P36544 502 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 PPP5CP53041 499 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 ZNF79Q15937 498 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 TNXAQ16473 311 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 C19orf54Q5BKX5 351 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 SPANXN2Q5MJ10 180 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 Q8N402 240 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 OR4F17Q8NGA8 305 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 OR4C16Q8NGL9 310 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 CD300LFQ8TDQ1 290 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 OR2A7Q96R45 310 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 KLK15Q9H2R5 256 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
USP46-209ENST00000514536 MGAM2Q2M2H8 2515 aa10.91□□□□□ -0.66
USP46-209ENST00000514536 WIPF1O43516 503 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 SOX15O60248 233 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 IGLV1-40P01703 118 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 PF4V1P10720 104 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 PI3P19957 117 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 PTBP1P26599 531 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP46-209ENST00000514536 PSMB8P28062 276 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 LPAR6P43657 344 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 AKIRIN2Q53H80 203 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 TMEM65Q6PI78 240 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 TBC1D26Q86UD7 250 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 PUSL1Q8N0Z8 303 aaKnown RBP10.9□□□□□ -0.66
USP46-209ENST00000514536 RNF152Q8N8N0 203 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 VSTM2AQ8TAG5 236 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 AIFM2Q9BRQ8 373 aa10.9□□□□□ -0.66
USP46-209ENST00000514536 FOXA2Q9Y261 457 aaPredicted RBP10.9□□□□□ -0.66
USP46-209ENST00000514536 A6NHS1 94 aa10.9□□□□□ -0.67
USP46-209ENST00000514536 MSGN1A6NI15 193 aa10.9□□□□□ -0.67
USP46-209ENST00000514536 NUDT19A8MXV4 375 aa10.9□□□□□ -0.67
USP46-209ENST00000514536 ACTL6BO94805 426 aa10.9□□□□□ -0.67
USP46-209ENST00000514536 KBTBD11O94819 623 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms