RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 COA4Q9NYJ1 87 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 MRPS7Q9Y2R9 242 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 PRELID3BQ9Y3B1 194 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 RYR3Q15413 4870 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 TRAV18A0A075B6X5 111 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 MSGN1A6NI15 193 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 IGLV1-51P01701 117 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 OR9G9P0C7N8 305 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 APELAP0DMC3 54 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 BRWD1-AS2P59051 145 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 ARPC4P59998 168 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 KLF5Q13887 457 aaPredicted RBP8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 MSMO1Q15800 293 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 TIMM50Q3ZCQ8 353 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 HOGA1Q86XE5 327 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 MMD2Q8IY49 270 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 GVQW1Q8N7I0 195 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 OR4S2Q8NH73 311 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 TCTEX1D2Q8WW35 142 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 ACOT12Q8WYK0 555 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 USMG5Q96IX5 58 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 OR4C12Q96R67 309 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 HSD17B10Q99714 261 aaKnown RBP8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 ELOVL1Q9BW60 279 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 AUNIPQ9H7T9 357 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 SPATA2Q9UM82 520 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 U3KQK5 164 aa8.01□□□□□ -1.13
HMGXB3-205ENST00000514469 TRBV9A0A0B4J1U6 114 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 FAM223BA6NKX1 122 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 MPPED1O15442 326 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 KBTBD11O94819 623 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 TGFBR1P36897 503 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF45Q02386 682 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 C10orf55Q5SWW7 151 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF66Q6ZN08 573 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 FAM223AQ8IWN6 122 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 PUSL1Q8N0Z8 303 aaKnown RBP8□□□□□ -1.13
HMGXB3-205ENST00000514469 OR13F1Q8NGS4 319 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 VSTM2AQ8TAG5 236 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 SNAPC3Q92966 411 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 SPIN2AQ99865 258 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 ASCL2Q99929 193 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 SPIN2BQ9BPZ2 258 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 DCUN1D5Q9BTE7 237 aa8□□□□□ -1.13
HMGXB3-205ENST00000514469 PEF1Q9UBV8 284 aaKnown RBP8□□□□□ -1.13
HMGXB3-205ENST00000514469 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TRIM64CA6NLI5 447 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TEX22C9J3V5 150 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 PPYP01298 95 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 PTHLHP12272 177 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 FCGR2CP31995 323 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 IL34Q6ZMJ4 242 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 CROCCP3Q8IVE0 287 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 VKORC1L1Q8N0U8 176 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 MFSD4AQ8N468 514 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TTC9CQ8N5M4 171 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 OR9G4Q8NGQ1 327 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TMEM167AQ8TBQ9 72 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 YIPF6Q96EC8 236 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 RSRP1Q9BUV0 290 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 AKIP1Q9NQ31 210 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 DIABLOQ9NR28 239 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 TAS2R8Q9NYW2 309 aa7.99□□□□□ -1.13
HMGXB3-205ENST00000514469 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 A0A1B0GW64 132 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 XRCC3O43542 346 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 AIREO43918 545 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 ACTL6BO94805 426 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 OR2A4O95047 310 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 TNFAIP8O95379 198 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 PRH1P02810 166 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 MAS1LP35410 378 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 KIR2DS2P43631 304 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 CBX5P45973 191 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 SYNJ2BPP57105 145 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 RHOGP84095 191 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 EXOSC2Q13868 293 aaKnown RBP7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 UBE2NLQ5JXB2 153 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 ANKRD13BQ86YJ7 626 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 ZBTB34Q8NCN2 500 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 OR5AP2Q8NGF4 316 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 SECTM1Q8WVN6 248 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 OR2A7Q96R45 310 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 GPHA2Q96T91 129 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 CCL28Q9NRJ3 127 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 SIGLEC8Q9NYZ4 499 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 ADAM30Q9UKF2 790 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 ANAPC10Q9UM13 185 aa7.98□□□□□ -1.13
HMGXB3-205ENST00000514469 A0A087WXM4 84 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 HMX3A6NHT5 357 aa7.97□□□□□ -1.13
HMGXB3-205ENST00000514469 NPIPB5A8MRT5 1133 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms