RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
SH3D19-209ENST00000514013 GPR176Q14439 515 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 TNXAQ16473 311 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 ZNF585BQ52M93 769 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 TMEM177Q53S58 311 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 AWAT2Q6E213 333 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 OR10K2Q6IF99 312 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 C6orf201Q7Z4U5 140 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 Q8N1X5 172 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 AMBNQ9NP70 447 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 ABRACLQ9P1F3 81 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 EXOSC1Q9Y3B2 195 aaKnown RBP6.58□□□□□ -1.36
SH3D19-209ENST00000514013 FAT1Q14517 4588 aa6.58□□□□□ -1.36
SH3D19-209ENST00000514013 IGHV3-35A0A0C4DH35 117 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 TRBV5-5A0A0J9YX44 114 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 A0A1B0GW64 132 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 A0A1W2PPK0 400 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 HMX3A6NHT5 357 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 MPPED1O15442 326 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 ALPLP05186 524 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 HLA-DMBP28068 263 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 CEACAM6P40199 344 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 Q6ZR54 194 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 RBPMS2Q6ZRY4 209 aaKnown RBP6.57□□□□□ -1.36
SH3D19-209ENST00000514013 Q6ZTC4 211 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 CEACAM19Q7Z692 300 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 TTC9CQ8N5M4 171 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 JAGN1Q8N5M9 183 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 SETD6Q8TBK2 473 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 PTX4Q96A99 478 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
SH3D19-209ENST00000514013 KCNK15Q9H427 330 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 LRRC42Q9Y546 428 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 ORC6Q9Y5N6 252 aa6.57□□□□□ -1.36
SH3D19-209ENST00000514013 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 IGLV2-18A0A075B6J9 118 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 MFSD2BA6NFX1 497 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 TEX22C9J3V5 150 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 E7EUB6 86 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 DYNC1I1O14576 645 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 TSPAN4O14817 238 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 SHOXO15266 292 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 LALBAP00709 142 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 SCTP09683 121 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 LIMS3P0CW19 117 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 LIMS4P0CW20 117 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 RBMY1A1P0DJD3 496 aaKnown RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 RBMY1CP0DJD4 496 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 GABRB1P18505 474 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 CAPGP40121 348 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 GBX2P52951 348 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 RPS11P62280 158 aaKnown RBP eCLIP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 SNRPGP62308 76 aaKnown RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 LGALS9BQ3B8N2 356 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 SLC38A6Q8IZM9 456 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 CBR4Q8N4T8 237 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 Q8NAQ8 132 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 CD300LFQ8TDQ1 290 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 ACOT12Q8WYK0 555 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 GALNT14Q96FL9 552 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 CSTL1Q9H114 145 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 C5orf66Q9H5L9 145 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 ZNF430Q9H8G1 570 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-209ENST00000514013 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 ZNF221Q9UK13 617 aa6.56□□□□□ -1.36
SH3D19-209ENST00000514013 A0A0A6YYD4 124 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 NOTOA8MTQ0 251 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 MPTX1A8MV57 137 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 C16orf90A8MZG2 172 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 CD3GP09693 182 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 ZBTB25P24278 435 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 HTR2CP28335 458 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 RASSF2P50749 326 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 UBE2KP61086 200 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 HLA-DRB3P79483 266 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 MRPL28Q13084 256 aaKnown RBP6.55□□□□□ -1.36
SH3D19-209ENST00000514013 MED21Q13503 144 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 FAM106AQ4KMX7 169 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 FAM209BQ5JX69 171 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 OR2G6Q5TZ20 316 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 OR4A47Q6IF82 309 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 OR52I1Q8NGK6 324 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 TRUB1Q8WWH5 349 aaKnown RBP6.55□□□□□ -1.36
SH3D19-209ENST00000514013 CHRDL1Q9BU40 450 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 CHMP1AQ9HD42 196 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-209ENST00000514013 SDHAF2Q9NX18 166 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 RDH8Q9NYR8 311 aa6.55□□□□□ -1.36
SH3D19-209ENST00000514013 TRBV5-7A0A0A0MS05 114 aa6.54□□□□□ -1.36
SH3D19-209ENST00000514013 AMBPP02760 352 aa6.54□□□□□ -1.36
SH3D19-209ENST00000514013 IL6RP08887 468 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-209ENST00000514013 SAA1P0DJI8 122 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-209ENST00000514013 AREGP15514 252 aa6.54□□□□□ -1.36
SH3D19-209ENST00000514013 MEDAGQ5VYS4 303 aa6.54□□□□□ -1.36
SH3D19-209ENST00000514013 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms