RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 UCP3P55916 312 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 PIGPP57054 158 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 AP3S2P59780 193 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 NDPQ00604 133 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 CATR1Q13166 79 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 CBX3Q13185 183 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF846Q147U1 533 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 PSG5Q15238 335 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 MSMO1Q15800 293 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 C5orf64Q2M2E5 130 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 TMEM177Q53S58 311 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 SSX9Q7RTT3 188 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 OR4S2Q8NH73 311 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 OR2T6Q8NHC8 308 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 TERB2Q8NHR7 220 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 NOL4LQ96MY1 436 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 PRRT1Q99946 306 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 PRSS22Q9GZN4 317 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 C5orf66Q9H5L9 145 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 SERTAD4Q9NUC0 356 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 SLC2A8Q9NY64 477 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 KIAA1456Q9P272 454 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 PRELID3BQ9Y3B1 194 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 RNF114Q9Y508 228 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 M0QZK8 103 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 FCN1O00602 326 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 CTSDP07339 412 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 SAA1P0DJI8 122 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 RRASP10301 218 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 BTCP35070 178 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 GNB1P62873 340 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 PJVKQ0ZLH3 352 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 FOXL1Q12952 345 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 SP6Q3SY56 376 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 C10orf99Q6UWK7 81 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 LINC00299Q6ZSB3 139 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 SLC35E3Q7Z769 313 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 TMED4Q7Z7H5 227 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 CMTM1Q8IZ96 169 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 KLHDC1Q8N7A1 406 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 ADAD2Q8NCV1 583 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 NPBQ8NG41 125 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 TP53RKQ96S44 253 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 TSNAXQ99598 290 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 RTBDNQ9BSG5 229 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 FAM103A1Q9BTL3 118 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 CCDC32Q9BV29 185 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 LIN7CQ9NUP9 197 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 SCP2D1Q9UJQ7 156 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 FBXO7Q9Y3I1 522 aa7.75□□□□□ -1.17
TOPBP1-209ENST00000513818 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 ATP6V0E1O15342 81 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 PLA2G10O15496 165 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 SPDEFO95238 335 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 CRYGBP07316 175 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 MYOD1P15172 320 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 F2RP25116 425 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 KIR2DS2P43631 304 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 LPAR6P43657 344 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 PROK1P58294 105 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 SSBP2P81877 361 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 IFITM3Q01628 133 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 KRTAP21-3Q3LHN1 58 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF585BQ52M93 769 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 C10orf55Q5SWW7 151 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 LPCAT3Q6P1A2 487 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 C12orf54Q6X4T0 127 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 Q8N2B8 174 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 OR8H1Q8NGG4 311 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 ABHD5Q8WTS1 349 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 WFDC12Q8WWY7 111 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 BORCS5Q969J3 196 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 TMEM230Q96A57 120 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 BEX1Q9HBH7 125 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 COPZ2Q9P299 210 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 TBC1D24Q9ULP9 559 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 FLVCR2Q9UPI3 526 aa7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 C14orf166Q9Y224 244 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-209ENST00000513818 TRAV3A0A0B4J244 114 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 ARPC1BO15143 372 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 MPPED1O15442 326 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 UPK1BO75841 260 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 IGKV1-39P01597 117 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 IGHG2P01859 326 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 HLA-DRB1P01911 266 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 IGKV1D-39P04432 117 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 OR5AC1P0C628 307 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 APELAP0DMC3 54 aa7.73□□□□□ -1.17
TOPBP1-209ENST00000513818 S100GP29377 79 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms