RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMEM177Q53S58 311 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 OR2B11Q5JQS5 317 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 FAM74A1Q5RGS3 127 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 WDR25Q64LD2 544 aaPredicted RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 ZNF843Q8N446 348 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 OR5C1Q8NGR4 320 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 OSR1Q8TAX0 266 aaPredicted RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 PCNPQ8WW12 178 aaKnown RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 IGFBPL1Q8WX77 278 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 LEAP2Q969E1 77 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 CITED4Q96RK1 184 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 ATP5SQ99766 215 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 SMIM3Q9BZL3 60 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 TMEM133Q9H2Q1 129 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 HIPK2Q9H2X6 1198 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 RBKSQ9H477 322 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 PARP11Q9NR21 331 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 STRAPQ9Y3F4 350 aaKnown RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 hCG_1809904A0A1W2PP81 198 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 A0A1W2PPE2 198 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 A0A1W2PPE3 182 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 A0A1W2PR64 198 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 A0A1W2PRV1 198 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 UMAD1C9J7I0 102 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 KRBOX1C9JBD0 128 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 LYNX1G3V0Z9 82 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 TRIM77I1YAP6 450 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 OVOL3O00110 214 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 PPIHO43447 177 aaKnown RBP6.83□□□□□ -1.32
RNF4-220ENST00000513578 IGLV1-47P01700 117 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 OR9G9P0C7N8 305 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 LYNX1P0DP58 116 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 IL3RAP26951 378 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 GNG10P50151 68 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 EFNA4P52798 201 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 LINC00205P59089 165 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 GNB2P62879 340 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 HBG1P69891 147 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 HBG2P69892 147 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 RELBQ01201 579 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 TLE4Q04727 773 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 RTL8BQ17RB0 113 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 CLEC9AQ6UXN8 241 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 IL34Q6ZMJ4 242 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 C1orf122Q6ZSJ8 110 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 BEND2Q8NDZ0 799 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 OR4A16Q8NH70 328 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 TMEM140Q9NV12 185 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 BET1LQ9NYM9 111 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
RNF4-220ENST00000513578 ZNF257Q9Y2Q1 563 aa6.83□□□□□ -1.32
RNF4-220ENST00000513578 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 FBN2P35556 2912 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 PPIAL4CA0A0B4J2A2 164 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 C15orf61A6NNL5 157 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 H0YJW9 148 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 TEX46H3BTG2 121 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 M0R1W7 72 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 SHOXO15266 292 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 CST7O76096 145 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 CRYZL1O95825 349 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 IGHV3-7P01780 117 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 APOA2P02652 100 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 ARG1P05089 322 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 LIPFP07098 398 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 PPIAL4GP0DN37 164 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 ATP6V0CP27449 155 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 MC5RP33032 325 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 VDAC2P45880 294 aaPredicted RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 PRRX1P54821 245 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 ATP5IP56385 69 aaPredicted RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 HSPE1P61604 102 aaKnown RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 RPP30P78346 268 aaKnown RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 VWC2Q2TAL6 325 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 TOR2AQ5JU69 321 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 BTNL8Q6UX41 500 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 DPPA3Q6W0C5 159 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 CENPVQ7Z7K6 275 aaPredicted RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 HAPLN4Q86UW8 402 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 PDPNQ86YL7 162 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 ABHD12Q8N2K0 398 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 COMMD1Q8N668 190 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 ZNF525Q8N782 197 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 DTD1Q8TEA8 209 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 RHOVQ96L33 236 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 PSMG3Q9BT73 122 aaPredicted RBP6.82□□□□□ -1.32
RNF4-220ENST00000513578 MMP26Q9NRE1 261 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 SLC35D1Q9NTN3 355 aa6.82□□□□□ -1.32
RNF4-220ENST00000513578 TMEM14BQ9NUH8 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms