RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 C14orf166Q9Y224 244 aaKnown RBP16.63■□□□□ 0.25
NEIL3-202ENST00000513321 CRYGBP07316 175 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 UBE2KP61086 200 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 VMA21Q3ZAQ7 101 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 VKORC1L1Q8N0U8 176 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 TCTEX1D1Q8N7M0 179 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 SCGB3A2Q96PL1 93 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 C5orf66Q9H5L9 145 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 TPSG1Q9NRR2 321 aa16.62■□□□□ 0.25
NEIL3-202ENST00000513321 NAP1L6A6NFF2 107 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 HPRT1P00492 218 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 HRASP01112 189 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 LPAR6P43657 344 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 ZNF585BQ52M93 769 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 PPP1R27Q86WC6 154 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 CCDC71LQ8N9Z2 235 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 TEX45Q8NA69 505 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 PLEKHA2Q9HB19 425 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 VSIG4Q9Y279 399 aa16.61■□□□□ 0.25
NEIL3-202ENST00000513321 CENPXA8MT69 81 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 PLA2G10O15496 165 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 C3orf56Q8N813 242 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 RHOVQ96L33 236 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 C7orf50Q9BRJ6 194 aaKnown RBP16.6■□□□□ 0.25
NEIL3-202ENST00000513321 WNT10AQ9GZT5 417 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 IGHV7-81A0A0B4J1V7 117 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 KCNAB3O43448 404 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 S1PR2O95136 353 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 SAA1P0DJI8 122 aaPredicted RBP16.6■□□□□ 0.25
NEIL3-202ENST00000513321 CCR6P51684 374 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 CX3CL1P78423 397 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 PJVKQ0ZLH3 352 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 FOXRED2Q8IWF2 684 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 KLHDC1Q8N7A1 406 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 NOL4LQ96MY1 436 aaPredicted RBP16.6■□□□□ 0.25
NEIL3-202ENST00000513321 SLC25A21Q9BQT8 299 aaPredicted RBP16.6■□□□□ 0.25
NEIL3-202ENST00000513321 AIFM2Q9BRQ8 373 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 LINC00527Q9UJ94 153 aa16.6■□□□□ 0.25
NEIL3-202ENST00000513321 C3orf85A0A1B0GTC6 90 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 TAS2R31P59538 309 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 ZNF562Q6V9R5 426 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 SSX9Q7RTT3 188 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 CENPVQ7Z7K6 275 aaPredicted RBP16.59■□□□□ 0.25
NEIL3-202ENST00000513321 WFDC12Q8WWY7 111 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 OR51J1Q9H342 316 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 FAM212BQ9NTI7 297 aaPredicted RBP16.59■□□□□ 0.25
NEIL3-202ENST00000513321 TENM1Q9UKZ4 2725 aa16.59■□□□□ 0.25
NEIL3-202ENST00000513321 TEX13DA0A0J9YY54 714 aaPredicted RBP16.58■□□□□ 0.24
NEIL3-202ENST00000513321 AP4M1O00189 453 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 CA2P00918 260 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 NQO2P16083 231 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 KRTAP10-3P60369 221 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 ADAD2Q8NCV1 583 aaKnown RBP16.58■□□□□ 0.24
NEIL3-202ENST00000513321 TP53RKQ96S44 253 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 COMMD9Q9P000 198 aa16.58■□□□□ 0.24
NEIL3-202ENST00000513321 STAB1Q9NY15 2570 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 H0Y980 276 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 OR2A4O95047 310 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 SERPINE2P07093 398 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 SRSF4Q08170 494 aaKnown RBP16.57■□□□□ 0.24
NEIL3-202ENST00000513321 PRSS8Q16651 343 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 MRGPRG-AS1Q2M3A8 158 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 SP6Q3SY56 376 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 PUSL1Q8N0Z8 303 aaKnown RBP16.57■□□□□ 0.24
NEIL3-202ENST00000513321 SPATA3Q8NHX4 192 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 VSTM2AQ8TAG5 236 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 R3HDM4Q96D70 268 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 OR2A7Q96R45 310 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 ZNF747Q9BV97 191 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 PARP11Q9NR21 331 aa16.57■□□□□ 0.24
NEIL3-202ENST00000513321 LYRM1O43325 122 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 UPK1BO75841 260 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 IGF1P05019 195 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 RPA2P15927 270 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 BTCP35070 178 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 GNB1P62873 340 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 NDPQ00604 133 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 RBMS2Q15434 407 aaKnown RBP16.56■□□□□ 0.24
NEIL3-202ENST00000513321 POU2AF1Q16633 256 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 OR4A47Q6IF82 309 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 STPG2Q8N412 459 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 TMEM230Q96A57 120 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 NAA60Q9H7X0 242 aa16.56■□□□□ 0.24
NEIL3-202ENST00000513321 ZNF430Q9H8G1 570 aaPredicted RBP16.56■□□□□ 0.24
NEIL3-202ENST00000513321 CRYM-AS1A6NIL9 109 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 ATP6V0E1O15342 81 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 CNIH1O95406 144 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 KRASP01116 189 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 AKR1C4P17516 323 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 FXYD3Q14802 87 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 DMBX1Q8NFW5 382 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 TMEM167AQ8TBQ9 72 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 WIPF2Q8TF74 440 aaPredicted RBP16.55■□□□□ 0.24
NEIL3-202ENST00000513321 CHPT1Q8WUD6 406 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 ARPC1BO15143 372 aaKnown RBP16.55■□□□□ 0.24
NEIL3-202ENST00000513321 KBTBD11O94819 623 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 NDUFB6O95139 128 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 IGKV1-39P01597 117 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 IGKV1D-39P04432 117 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 G6PCP35575 357 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms