RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PLA2G5P39877 138 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 MRPL18Q9H0U6 180 aaKnown RBP12.56□□□□□ -0.4
USP38-202ENST00000510377 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 OR6C3Q9NZP0 311 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 GFRA3O60609 400 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 RANP62826 216 aaKnown RBP12.56□□□□□ -0.4
USP38-202ENST00000510377 RNASEKQ6P5S7 137 aaKnown RBP12.56□□□□□ -0.4
USP38-202ENST00000510377 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 GZMBP10144 247 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 HOXA4Q00056 320 aaPredicted RBP12.56□□□□□ -0.4
USP38-202ENST00000510377 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 SSX7Q7RTT5 188 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 ATOH7Q8N100 152 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 STARD4Q96DR4 205 aa12.56□□□□□ -0.4
USP38-202ENST00000510377 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 HSBP1L1C9JCN9 74 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 ZNF726P1Q15940 193 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 ZNF766Q5HY98 468 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 POM121L2Q96KW2 1035 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 ETV2O00321 342 aaPredicted RBP12.55□□□□□ -0.4
USP38-202ENST00000510377 CXorf1O96002 111 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 CEACAM1P13688 526 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 SFRP2Q96HF1 295 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 SLC35E1Q96K37 410 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 PKIBQ9C010 78 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 LOC102723996A0A087X1L8 192 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 HELTA6NFD8 242 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 DIRC3C9JPN6 131 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 NPY1RP25929 384 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 TAS2R45P59539 299 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 UBE2G1P62253 170 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 ZNF124Q15973 351 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 ABLIM2Q6H8Q1 611 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 TIPARPQ7Z3E1 657 aaKnown RBP12.55□□□□□ -0.4
USP38-202ENST00000510377 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
USP38-202ENST00000510377 TCF21O43680 179 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 ARL2-SNX15V9GYD0 113 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 FAM90A26D6RGX4 464 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 IGLV3-1P01715 115 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 CLDN14O95500 239 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 UCP2P55851 309 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 ZBTB34Q8NCN2 500 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 AP1S3Q96PC3 154 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 WNK2Q9Y3S1 2297 aa12.54□□□□□ -0.4
USP38-202ENST00000510377 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 NEURL1O76050 574 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
USP38-202ENST00000510377 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
USP38-202ENST00000510377 A6NNC1 897 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 VAMP3Q15836 100 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 RPL39P5Q59GN2 51 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 OR5R1Q8NH85 324 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 GTF3AQ92664 365 aaKnown RBP12.53□□□□□ -0.4
USP38-202ENST00000510377 RND1Q92730 232 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 EREGO14944 169 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 PCSK4Q6UW60 755 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 FOXL2NBQ6ZUU3 175 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
USP38-202ENST00000510377 LTBP2Q14767 1821 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 HPRT1P00492 218 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 IGHV3-48P01763 117 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 CRYBB3P26998 211 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 SOX8P57073 446 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 TGIF2LYQ8IUE0 185 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 BLNKQ8WV28 456 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 CORO2AQ92828 525 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 SLC45A2Q9UMX9 530 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.4
USP38-202ENST00000510377 UBE2L3P68036 154 aaKnown RBP12.52□□□□□ -0.4
USP38-202ENST00000510377 PLGLAQ15195 96 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 MOGAT3Q86VF5 341 aa12.52□□□□□ -0.4
USP38-202ENST00000510377 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 RAB29O14966 203 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 COX7A2P2O60397 106 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 IGKV1D-33P01593 117 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 IGKV1-33P01594 117 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 GNB2P62879 340 aa12.52□□□□□ -0.41
USP38-202ENST00000510377 MRPS11P82912 194 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms