RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 CDK10Q15131 360 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 TNXAQ16473 311 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 MFSD4AQ8N468 514 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 ADAD2Q8NCV1 583 aaKnown RBP13.75□□□□□ -0.21
TPM3-220ENST00000509601 BEST4Q8NFU0 473 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
TPM3-220ENST00000509601 YIPF6Q96EC8 236 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 RYR3Q15413 4870 aa13.75□□□□□ -0.21
TPM3-220ENST00000509601 DNAH7Q8WXX0 4024 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 ANKRD34BA5PLL1 514 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 TMEM127O75204 238 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 LY86O95711 162 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 OR2B11Q5JQS5 317 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 ZNF343Q6P1L6 599 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 KCTD9Q7L273 389 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 VKORC1L1Q8N0U8 176 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 GPHA2Q96T91 129 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 PHB2Q99623 299 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 ASCL2Q99929 193 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 DCUN1D5Q9BTE7 237 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 CCL28Q9NRJ3 127 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 PRELID3BQ9Y3B1 194 aa13.74□□□□□ -0.21
TPM3-220ENST00000509601 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 FCGR2CP31995 323 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 PUSL1Q8N0Z8 303 aaKnown RBP13.73□□□□□ -0.21
TPM3-220ENST00000509601 ACOT12Q8WYK0 555 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 USMG5Q96IX5 58 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
TPM3-220ENST00000509601 HSD17B10Q99714 261 aaKnown RBP13.73□□□□□ -0.21
TPM3-220ENST00000509601 A0A087WXM4 84 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 E7EUB6 86 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 AIREO43918 545 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 FCER2P06734 321 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 GP9P14770 177 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 ZP3P21754 424 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 ZNF45Q02386 682 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 ZNF66Q6ZN08 573 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 TTC9CQ8N5M4 171 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 TSPAN14Q8NG11 270 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 OR6Q1Q8NGQ2 317 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 TCTEX1D2Q8WW35 142 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 SNAPC3Q92966 411 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 PEF1Q9UBV8 284 aaKnown RBP13.72□□□□□ -0.21
TPM3-220ENST00000509601 SMAD5-AS1Q9Y6J3 95 aa13.72□□□□□ -0.21
TPM3-220ENST00000509601 TRBV9A0A0B4J1U6 114 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 XRCC3O43542 346 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 IGLV1-51P01701 117 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 PRH1P02810 166 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
TPM3-220ENST00000509601 ARPC4P59998 168 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
TPM3-220ENST00000509601 MSMO1Q15800 293 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 HAPLN4Q86UW8 402 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 GIMAP1Q8WWP7 306 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 WWC2-AS2Q96NR7 200 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 ELOVL1Q9BW60 279 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 AKIP1Q9NQ31 210 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.21
TPM3-220ENST00000509601 MRPS7Q9Y2R9 242 aaKnown RBP13.71□□□□□ -0.21
TPM3-220ENST00000509601 A0A1B0GW64 132 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 OR2A4O95047 310 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 PPYP01298 95 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 OR5AP2Q8NGF4 316 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 TMEM167AQ8TBQ9 72 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 SECTM1Q8WVN6 248 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
TPM3-220ENST00000509601 OR2A7Q96R45 310 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 SPIN2AQ99865 258 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 SPIN2BQ9BPZ2 258 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 U3KQK5 164 aa13.7□□□□□ -0.22
TPM3-220ENST00000509601 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 MEIS3P1A6NDR6 274 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 TEX22C9J3V5 150 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 MPPED1O15442 326 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 TNFSF12O43508 249 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 ACTL6BO94805 426 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 KBTBD11O94819 623 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 CBX5P45973 191 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 SYNJ2BPP57105 145 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 RHOGP84095 191 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 SBSPONQ8IVN8 264 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 Q8N1Y9 231 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 OR9G4Q8NGQ1 327 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 OR13F1Q8NGS4 319 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 STAB2Q8WWQ8 2551 aa13.69□□□□□ -0.22
TPM3-220ENST00000509601 CREBL2O60519 120 aaPredicted RBP13.68□□□□□ -0.22
TPM3-220ENST00000509601 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms