RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LYSTQ99698 3801 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 IGKV1D-13A0A0B4J2D9 117 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 J3QRK9 145 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 HLA-DQB1P01920 261 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 IGKV1-13P0DP09 117 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 ZNF45Q02386 682 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 C10orf55Q5SWW7 151 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 CASC10Q5T4H9 136 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 SFXN4Q6P4A7 337 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 KCTD9Q7L273 389 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 ACOT12Q8WYK0 555 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 THAP7Q9BT49 309 aaPredicted RBP9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 ST6GALNAC5Q9BVH7 336 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 DCSTAMPQ9H295 470 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 RBMX2Q9Y388 322 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 RYR2Q92736 4967 aa9.91□□□□□ -0.82
HMGCS1-205ENST00000508319 TRBV9A0A0B4J1U6 114 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 A8MZ25 164 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 MPPED1O15442 326 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 SSX5O60225 188 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 FCGR3BO75015 233 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 OR2A4O95047 310 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 PRH1P02810 166 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 CSN3P07498 182 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 CD36P16671 472 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 GNG2P59768 71 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 EIF4EBP1Q13541 118 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 CDK10Q15131 360 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 RPEL1Q2QD12 228 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 OR2B11Q5JQS5 317 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 CNIH2Q6PI25 160 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 SGPP2Q8IWX5 399 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 FCGR1BQ92637 280 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 ZMAT4Q9H898 229 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 AKIP1Q9NQ31 210 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 SIGLEC8Q9NYZ4 499 aa9.9□□□□□ -0.82
HMGCS1-205ENST00000508319 FAM223BA6NKX1 122 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 BMPR1BO00238 502 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 CREBL2O60519 120 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 TUSC2O75896 110 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 SCGNO76038 276 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 RHOGP84095 191 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 EXOSC2Q13868 293 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 TPRA1Q86W33 373 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 FAM223AQ8IWN6 122 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 MMD2Q8IY49 270 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 SLC25A38Q96DW6 304 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 RHBDL2Q9NX52 303 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 MRPS7Q9Y2R9 242 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 RRP15Q9Y3B9 282 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-205ENST00000508319 H0Y980 276 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 SLC22A5O76082 557 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 ACTL6BO94805 426 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 KBTBD11O94819 623 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 ATP6V1G2O95670 118 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 SDC2P34741 201 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 VKORC1L1Q8N0U8 176 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 TTC9CQ8N5M4 171 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 OR4S2Q8NH73 311 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 SNAPC3Q92966 411 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 DCUN1D5Q9BTE7 237 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 ANXA10Q9UJ72 324 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
HMGCS1-205ENST00000508319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 A0A1B0GW64 132 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 IZUMO1RA6ND01 250 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 TEX22C9J3V5 150 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 LCE2BO14633 110 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 MECP2P51608 486 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 ADAMTSL5Q6ZMM2 481 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 C19orf35Q6ZS72 473 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 Q8N402 240 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 OR5H6Q8NGV6 325 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 VSTM2AQ8TAG5 236 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 TCTEX1D2Q8WW35 142 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 GPHA2Q96T91 129 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 HSD17B10Q99714 261 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 RNF167Q9H6Y7 350 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 EDA2RQ9HAV5 297 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 PEMTQ9UBM1 199 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 SPATA2Q9UM82 520 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
HMGCS1-205ENST00000508319 HMX3A6NHT5 357 aa9.86□□□□□ -0.83
HMGCS1-205ENST00000508319 E7EUB6 86 aa9.86□□□□□ -0.83
HMGCS1-205ENST00000508319 OR2J3O76001 311 aa9.86□□□□□ -0.83
HMGCS1-205ENST00000508319 IL6RP08887 468 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms