RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 C15orf41Q9Y2V0 281 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CBY1Q9Y3M2 126 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 CHCHD2Q9Y6H1 151 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 URGCP-MRPS24S4R325 110 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZANQ9Y493 2812 aa1.98□□□□□ -2.09
TRAPPC11-205ENST00000506426 HIVEP2P31629 2446 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 MED13LQ71F56 2210 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CCDC88CQ9P219 2028 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 LOC102724200A0A096LPH7 203 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 IGHV1-3A0A0C4DH29 117 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 TMEM72A0PK05 275 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR2AT4A6NND4 320 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 DEFB108AA8MXU0 73 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SULT1C2O00338 296 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 UPK2O00526 184 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CDIPTO14735 213 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SHOX2O60902 331 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SCN2BO60939 215 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 UGT2B11O75310 529 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF324O75467 553 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 STK16O75716 305 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 DHRS3O75911 302 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 WISP3O95389 354 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SNAP29O95721 258 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CDK1P06493 297 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 UGT2B10P36537 528 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CDK9P50750 372 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 RAP1GDS1P52306 607 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 PITPNAQ00169 270 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CD164Q04900 197 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 PRKCDQ05655 676 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 PLCXD2Q0VAA5 305 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 STX5Q13190 355 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SLAMF1Q13291 335 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 FAM222AQ5U5X8 452 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 KHDRBS2Q5VWX1 349 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 C4orf22Q6V702 233 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 FAM231DQ6ZW35 169 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SSX7Q7RTT5 188 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 GALNT10Q86SR1 603 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CTAGE3PQ8IX95 158 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 IQCF2Q8IXL9 164 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CNEP1R1Q8N9A8 125 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 MORN4Q8NDC4 146 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 KCTD4Q8WVF5 259 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 OR5P2Q8WZ92 322 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 RORBQ92753 470 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CPNE4Q96A23 557 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZMYND19Q96E35 227 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 CCL19Q99731 98 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPIN2AQ99865 258 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SPIN2BQ9BPZ2 258 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 MARVELD1Q9BSK0 173 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 EFCAB11Q9BUY7 163 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 ZNF717Q9BY31 904 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 PARP11Q9NR21 331 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 TAS2R5Q9NYW4 299 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 DKKL1Q9UK85 242 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 SNX24Q9Y343 169 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 INSIG2Q9Y5U4 225 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 FBN1P35555 2871 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 MXRA5Q9NR99 2828 aa1.97□□□□□ -2.09
TRAPPC11-205ENST00000506426 INTS1Q8N201 2190 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 KIAA1549Q9HCM3 1950 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 KIR2DS1A0A191URI9 304 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 C7orf66A4D0T2 115 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 ZNF850A8MQ14 1090 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CLDN34H7C241 214 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 UPK1AO00322 258 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 TP53I11O14683 189 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 FABP7O15540 132 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 NDUFS6O75380 124 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 RCBTB2O95199 551 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 MPZL1O95297 269 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 BRI3O95415 125 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 GPR75O95800 540 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 EPPINO95925 133 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 C1QAP02745 245 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 IL4P05112 153 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 SNRPAP09012 282 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CPMP14384 443 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 GABRA1P14867 456 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 PSMB9P28065 219 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 KDELR2P33947 212 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CRATP43155 626 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CMC4P56277 68 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 DR1Q01658 176 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 ZNF816Q0VGE8 651 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 BNIP2Q12982 314 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 EBI3Q14213 229 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 UAP1Q16222 522 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CEACAM21Q3KPI0 293 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 COX19Q49B96 90 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 ABCA11PQ4W5N1 156 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 TRMT12Q53H54 448 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 CLEC12AQ5QGZ9 265 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 NIPAL1Q6NVV3 410 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 MED27Q6P2C8 311 aa1.96□□□□□ -2.1
TRAPPC11-205ENST00000506426 COMMD6Q7Z4G1 85 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms