RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 HSPB9Q9BQS6 159 aa8.8□□□□□ -1
VCAN-205ENST00000503923 AIFM2Q9BRQ8 373 aa8.8□□□□□ -1
VCAN-205ENST00000503923 C14orf166Q9Y224 244 aaKnown RBP8.8□□□□□ -1
VCAN-205ENST00000503923 ANK2Q01484 3957 aa8.79□□□□□ -1
VCAN-205ENST00000503923 TENM1Q9UKZ4 2725 aa8.79□□□□□ -1
VCAN-205ENST00000503923 IGHV7-81A0A0B4J1V7 117 aa8.79□□□□□ -1
VCAN-205ENST00000503923 LINC01548A6NM66 108 aa8.79□□□□□ -1
VCAN-205ENST00000503923 FCN1O00602 326 aa8.79□□□□□ -1
VCAN-205ENST00000503923 MPPED1O15442 326 aa8.79□□□□□ -1
VCAN-205ENST00000503923 HRASP01112 189 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CTSDP07339 412 aaPredicted RBP8.79□□□□□ -1
VCAN-205ENST00000503923 SAA1P0DJI8 122 aaPredicted RBP8.79□□□□□ -1
VCAN-205ENST00000503923 IL7P13232 177 aa8.79□□□□□ -1
VCAN-205ENST00000503923 PI3P19957 117 aa8.79□□□□□ -1
VCAN-205ENST00000503923 F2RP25116 425 aa8.79□□□□□ -1
VCAN-205ENST00000503923 PIGPP57054 158 aa8.79□□□□□ -1
VCAN-205ENST00000503923 SHISA2Q6UWI4 295 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CENPVQ7Z7K6 275 aaPredicted RBP8.79□□□□□ -1
VCAN-205ENST00000503923 STPG2Q8N412 459 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CCDC71LQ8N9Z2 235 aa8.79□□□□□ -1
VCAN-205ENST00000503923 VSTM2AQ8TAG5 236 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CHPT1Q8WUD6 406 aa8.79□□□□□ -1
VCAN-205ENST00000503923 MRGPRFQ96AM1 343 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CLCC1Q96S66 551 aa8.79□□□□□ -1
VCAN-205ENST00000503923 CCDC32Q9BV29 185 aa8.79□□□□□ -1
VCAN-205ENST00000503923 GON7Q9BXV9 100 aa8.79□□□□□ -1
VCAN-205ENST00000503923 OR51J1Q9H342 316 aa8.79□□□□□ -1
VCAN-205ENST00000503923 PLEKHA2Q9HB19 425 aa8.79□□□□□ -1
VCAN-205ENST00000503923 FAM212BQ9NTI7 297 aaPredicted RBP8.79□□□□□ -1
VCAN-205ENST00000503923 COPZ2Q9P299 210 aa8.79□□□□□ -1
VCAN-205ENST00000503923 ZNF580Q9UK33 172 aa8.79□□□□□ -1
VCAN-205ENST00000503923 NAP1L6A6NFF2 107 aa8.78□□□□□ -1
VCAN-205ENST00000503923 CREBL2O60519 120 aaPredicted RBP8.78□□□□□ -1
VCAN-205ENST00000503923 CA2P00918 260 aa8.78□□□□□ -1
VCAN-205ENST00000503923 IGF1P05019 195 aa8.78□□□□□ -1
VCAN-205ENST00000503923 NQO2P16083 231 aa8.78□□□□□ -1
VCAN-205ENST00000503923 TAS2R31P59538 309 aa8.78□□□□□ -1
VCAN-205ENST00000503923 KRTAP10-3P60369 221 aa8.78□□□□□ -1
VCAN-205ENST00000503923 SLC35B1P78383 322 aa8.78□□□□□ -1
VCAN-205ENST00000503923 CX3CL1P78423 397 aa8.78□□□□□ -1
VCAN-205ENST00000503923 ZNF562Q6V9R5 426 aa8.78□□□□□ -1
VCAN-205ENST00000503923 WIPF2Q8TF74 440 aaPredicted RBP8.78□□□□□ -1
VCAN-205ENST00000503923 RHOVQ96L33 236 aa8.78□□□□□ -1
VCAN-205ENST00000503923 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
VCAN-205ENST00000503923 CITED1Q99966 193 aa8.78□□□□□ -1
VCAN-205ENST00000503923 WDR12Q9GZL7 423 aaKnown RBP8.78□□□□□ -1
VCAN-205ENST00000503923 PARP11Q9NR21 331 aa8.78□□□□□ -1
VCAN-205ENST00000503923 TPSG1Q9NRR2 321 aa8.78□□□□□ -1
VCAN-205ENST00000503923 COMMD9Q9P000 198 aa8.78□□□□□ -1
VCAN-205ENST00000503923 LINC00527Q9UJ94 153 aa8.78□□□□□ -1
VCAN-205ENST00000503923 GPR132Q9UNW8 380 aa8.78□□□□□ -1
VCAN-205ENST00000503923 PLXNB1O43157 2135 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 PSMB11A5LHX3 300 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 CENPXA8MT69 81 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 ATP6V0E1O15342 81 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 FBXO24O75426 580 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 B3GALNT1O75752 331 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 OR2A4O95047 310 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 S1PR2O95136 353 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 VDAC1P21796 283 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 CD40LGP29965 261 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 LPAR6P43657 344 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 SRSF4Q08170 494 aaKnown RBP8.77□□□□□ -1.01
VCAN-205ENST00000503923 ZNF846Q147U1 533 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 POU2AF1Q16633 256 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 MMD2Q8IY49 270 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 VKORC1L1Q8N0U8 176 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 PUSL1Q8N0Z8 303 aaKnown RBP8.77□□□□□ -1.01
VCAN-205ENST00000503923 OR5AU1Q8NGC0 362 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 OR4X2Q8NGF9 303 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 ABHD5Q8WTS1 349 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 OR2A7Q96R45 310 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 C7orf50Q9BRJ6 194 aaKnown RBP8.77□□□□□ -1.01
VCAN-205ENST00000503923 RTBDNQ9BSG5 229 aaPredicted RBP8.77□□□□□ -1.01
VCAN-205ENST00000503923 C5orf66Q9H5L9 145 aa8.77□□□□□ -1.01
VCAN-205ENST00000503923 C3orf85A0A1B0GTC6 90 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 H0Y980 276 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 ACTL6BO94805 426 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 KBTBD11O94819 623 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 CNIH1O95406 144 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 RPA2P15927 270 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 CRIP2P52943 208 aaPredicted RBP8.76□□□□□ -1.01
VCAN-205ENST00000503923 ERVK-16P61578 105 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 GNB1P62873 340 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 NDPQ00604 133 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 TMEM267Q0VDI3 215 aaPredicted RBP8.76□□□□□ -1.01
VCAN-205ENST00000503923 PJVKQ0ZLH3 352 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 FXYD3Q14802 87 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 PRSS8Q16651 343 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 MRGPRG-AS1Q2M3A8 158 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 ZNF585BQ52M93 769 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 SSX9Q7RTT3 188 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 COMMD1Q8N668 190 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 DMBX1Q8NFW5 382 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 SGMS2Q8NHU3 365 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 TMEM167AQ8TBQ9 72 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 ARPC1AQ92747 370 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms