RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 GRPEL2Q8TAA5 225 aa16.12■□□□□ 0.17
PDGFRA-203ENST00000503856 FXYD6Q9H0Q3 95 aa16.12■□□□□ 0.17
PDGFRA-203ENST00000503856 RBM38Q9H0Z9 239 aaKnown RBP16.12■□□□□ 0.17
PDGFRA-203ENST00000503856 MTFP1Q9UDX5 166 aa16.12■□□□□ 0.17
PDGFRA-203ENST00000503856 M0QYG6 137 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 SOX15O60248 233 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 SAA1P0DJI8 122 aaPredicted RBP16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 CDX1P47902 265 aaPredicted RBP16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 DGCR2P98153 550 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 AKIRIN2Q53H80 203 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 TMEM65Q6PI78 240 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 ETV3LQ6ZN32 361 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 VKORC1L1Q8N0U8 176 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 MCFD2Q8NI22 146 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 FCAMRQ8WWV6 532 aa16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 NXF2Q9GZY0 626 aaKnown RBP16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 FOXA2Q9Y261 457 aaPredicted RBP16.11■□□□□ 0.17
PDGFRA-203ENST00000503856 RAMP3O60896 148 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 SLC6A1P30531 599 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 KIR2DS2P43631 304 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 CATR1Q13166 79 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 KIAA0141Q14154 515 aaPredicted RBP16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 PRSS8Q16651 343 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 ACTBL2Q562R1 376 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 SPAG16Q8N0X2 631 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 TCTEX1D1Q8N7M0 179 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 OR51H1Q8NH63 302 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 MYOZ3Q8TDC0 251 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 BORCS5Q969J3 196 aa16.1■□□□□ 0.17
PDGFRA-203ENST00000503856 GABARAPH6UMI1 98 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 CD3DP04234 171 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 RAB9AP51151 201 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 IL18Q14116 193 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 VAX1Q5SQQ9 334 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 C1QL4Q86Z23 238 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 WFDC9Q8NEX5 89 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 CASTOR1Q8WTX7 329 aa16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 TINAGL1Q9GZM7 467 aaPredicted RBP16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 ZNF430Q9H8G1 570 aaPredicted RBP16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 RSL24D1Q9UHA3 163 aaKnown RBP16.09■□□□□ 0.17
PDGFRA-203ENST00000503856 CD33P20138 364 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 TNFSF8P32971 234 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 MRPS10P82664 201 aaKnown RBP16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 TNXAQ16473 311 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 RNASE10Q5GAN6 216 aaKnown RBP16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 AADACL3Q5VUY0 350 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 PYHIN1Q6K0P9 492 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 ZNF491Q8N8L2 437 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 RAX2Q96IS3 184 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 DUX3Q96PT4 197 aa16.08■□□□□ 0.16
PDGFRA-203ENST00000503856 G3V4G9 280 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 GPR31O00270 319 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 RBFOX2O43251 390 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 PGLYRP1O75594 196 aaPredicted RBP16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 HRASP01112 189 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 RLN1P04808 185 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 MYCNOSP40205 109 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 DEFB136Q30KP8 78 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 SSX9Q7RTT3 188 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 MRPL41Q8IXM3 137 aaKnown RBP16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 PUSL1Q8N0Z8 303 aaKnown RBP16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 OR5M8Q8NGP6 311 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 RHOVQ96L33 236 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 UBE2E2Q96LR5 201 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 P2RX4Q99571 388 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 RABL2AQ9UBK7 228 aaPredicted RBP16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 RABL2BQ9UNT1 228 aa16.07■□□□□ 0.16
PDGFRA-203ENST00000503856 MSGN1A6NI15 193 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 CCL24O00175 119 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 CTDSPLO15194 276 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 OR2A4O95047 310 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 IFNA6P05013 189 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 OXLD1Q5BKU9 147 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 ASPHD1Q5U4P2 390 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 MMD2Q8IY49 270 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 CMTM1Q8IZ96 169 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 LINC00482Q8N8I6 264 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 TMEM229BQ8NBD8 167 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 OR5T1Q8NG75 326 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 OR4D10Q8NGI6 311 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 SMIM4Q8WVI0 70 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 C4orf3Q8WVX3 66 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 MS4A10Q96PG2 267 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 OR2A7Q96R45 310 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 GNB4Q9HAV0 340 aa16.06■□□□□ 0.16
PDGFRA-203ENST00000503856 ZNF701M0R085 212 aaPredicted RBP16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 ACTL6BO94805 426 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 KBTBD11O94819 623 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 HPRT1P00492 218 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 APELAP0DMC3 54 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 TBPP20226 339 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 UCP3P55916 312 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 TAS2R19P59542 299 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 DEFA6Q01524 100 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 SSBP1Q04837 148 aaKnown RBP16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 PHLDA2Q53GA4 152 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 SAMD5Q5TGI4 173 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 LPCAT3Q6P1A2 487 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 POC5Q8NA72 575 aa16.05■□□□□ 0.16
PDGFRA-203ENST00000503856 VSTM2AQ8TAG5 236 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms