RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 PXMP2Q9NR77 195 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 HEBP1Q9NRV9 189 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 ZNF355PQ9NSJ1 428 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 SPANXCQ9NY87 97 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 GSKIPQ9P0R6 139 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 OPTCQ9UBM4 332 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 SLC7A11Q9UPY5 501 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 ANGPT4Q9Y264 503 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 SLC35A3Q9Y2D2 325 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 TSSC4Q9Y5U2 329 aaPredicted RBP1.53□□□□□ -2.16
CBX3-208ENST00000497498 KPTNQ9Y664 436 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 F5P12259 2224 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 MYH9P35579 1960 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 DOCK1Q14185 1865 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SIPA1L3O60292 1781 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 PLIN4Q96Q06 1357 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 MEIKINA0A087WXM9 373 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TGIF2-C20orf24A0A0A6YYL0 155 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 A0A0D9SFI3 127 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TRBV11-1A0A0K0K1C0 115 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 A0A1B0GUH1 482 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TMEM223A0PJW6 202 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 G3V3Q6 166 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TRAPPC2LH3BP13 241 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 K7EM74 188 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 M0R036 132 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 FAAHO00519 579 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 BCKDKO14874 412 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SCAMP2O15127 329 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 SIVA1O15304 175 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 FABP7O15540 132 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 LYRM1O43325 122 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 CDC40O60508 579 aaKnown RBP eCLIP1.52□□□□□ -2.17
CBX3-208ENST00000497498 LSM8O95777 96 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 SNAI1O95863 264 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 GCGP01275 180 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 IFNW1P05000 195 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 NMBP08949 121 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 UCHL1P09936 223 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR10J4P0C629 311 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 IGHV1-8P0DP01 117 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RNASE2P10153 161 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 ERGP11308 486 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 GABRA1P14867 456 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 GSTM3P21266 225 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 PSMA1P25786 263 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 CD82P27701 267 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SLC6A1P30531 599 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 FAUP35544 74 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 GPR4P46093 362 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 CAPZBP47756 277 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ACOT2P49753 483 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RPL14P50914 215 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 CLDN8P56748 225 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 UBE2G2P60604 165 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RPS23P62266 143 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 SLC35A2P78381 396 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 H3F3AP84243 136 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 CDK5Q00535 292 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 EMX1Q04741 257 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 FABP9Q0Z7S8 132 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RHEBQ15382 184 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RSU1Q15404 277 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SLC9A3R2Q15599 337 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR4D1Q15615 310 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 VAMP3Q15836 100 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 MAPK14Q16539 360 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 IMPG1Q17R60 797 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 IQCJQ1A5X6 159 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TMEM241Q24JQ0 296 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 C5orf64Q2M2E5 130 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SPIN4Q56A73 249 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 PYDC2Q56P42 97 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 C10orf91Q5T1B1 145 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TPTE2P1Q5T6R2 138 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZNF470Q6ECI4 717 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 LAMTOR1Q6IAA8 161 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RPL22L1Q6P5R6 122 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 TBPL2Q6SJ96 375 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 EPGNQ6UW88 154 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 FAM131AQ6UXB0 335 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TCF24Q7RTU0 167 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SLC16A13Q7RTY0 426 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 PID1Q7Z2X4 250 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 GRINAQ7Z429 371 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TRAPPC5Q8IUR0 188 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SLC30A8Q8IWU4 369 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 BAP18Q8IXM2 172 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SPICQ8N5J4 248 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 LRRC52Q8N7C0 313 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 COX18Q8N8Q8 333 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 UBAC2Q8NBM4 344 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 CHST4Q8NCG5 386 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TMEM161BQ8NDZ6 487 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ATP6V1C2Q8NEY4 427 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR4E2Q8NGC2 313 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR11H7Q8NGC8 314 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR4K5Q8NGD3 323 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms