RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 MED6O75586 246 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 IGKV1-39P01597 117 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 IGKV1D-39P04432 117 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 PAX1P15863 534 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 REG1BP48304 166 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 BRWD1-AS2P59051 145 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 SRPXP78539 464 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 CLEC12BQ2HXU8 276 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 IAH1Q2TAA2 248 aaPredicted RBP13.78□□□□□ -0.2
LMNA-216ENST00000496738 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 SPAG16Q8N0X2 631 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 ASB13Q8WXK3 278 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 HSD17B10Q99714 261 aaKnown RBP13.78□□□□□ -0.2
LMNA-216ENST00000496738 GGACTQ9BVM4 153 aa13.78□□□□□ -0.2
LMNA-216ENST00000496738 IGHV2-26A0A0B4J1V2 119 aa13.77□□□□□ -0.21
LMNA-216ENST00000496738 LPAR6P43657 344 aa13.77□□□□□ -0.21
LMNA-216ENST00000496738 DIAPH2-AS1Q14236 149 aa13.77□□□□□ -0.21
LMNA-216ENST00000496738 MSMO1Q15800 293 aa13.77□□□□□ -0.21
LMNA-216ENST00000496738 ZNF66Q6ZN08 573 aa13.77□□□□□ -0.21
LMNA-216ENST00000496738 UNKLQ9H9P5 680 aaKnown RBP13.77□□□□□ -0.21
LMNA-216ENST00000496738 KLRD1Q13241 179 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 IZUMO4Q1ZYL8 232 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 PNKDQ8N490 385 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 BPIFCQ8NFQ6 507 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 OR9G1Q8NH87 305 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 PPP1R1CQ8WVI7 109 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 POLQO75417 2590 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 GCN1Q92616 2671 aaKnown RBP13.76□□□□□ -0.21
LMNA-216ENST00000496738 A0A087X0M5 115 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 A0A1B0GX30 115 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 FCGR3BO75015 233 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 S1PR2O95136 353 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 EPHA1P21709 976 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 C2orf50Q96LR7 162 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
LMNA-216ENST00000496738 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
LMNA-216ENST00000496738 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
LMNA-216ENST00000496738 TRAV14DV4A0A0A6YYC5 116 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A0G2JRQ6 117 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PR64 198 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 ARPC5O15511 151 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 ENSAO43768 121 aaKnown RBP13.75□□□□□ -0.21
LMNA-216ENST00000496738 SCGB1D2O95969 90 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 IFNA10P01566 189 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 CXCL2P19875 107 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 FABP9Q0Z7S8 132 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 FOXRED2Q8IWF2 684 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 FAM216AQ8WUB2 273 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PRD5 423 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PRF3 423 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 A0A1W2PRM7 423 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 NXPH3O95157 252 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
LMNA-216ENST00000496738 DEFB113Q30KQ7 82 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 MISP3Q96FF7 219 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 S1PR3Q99500 378 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 COMMD9Q9P000 198 aa13.75□□□□□ -0.21
LMNA-216ENST00000496738 IGHV2-70DA0A0C4DH43 119 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 BTBD17A6NE02 478 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 AKR1C2P52895 323 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 RAB2AP61019 212 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 NUTF2P61970 127 aaKnown RBP13.74□□□□□ -0.21
LMNA-216ENST00000496738 PAX2Q02962 417 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 ZNF383Q8NA42 475 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.74□□□□□ -0.21
LMNA-216ENST00000496738 L7N2F9 121 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 IGKV1-5P01602 117 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 RBP4P02753 201 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 G6PCP35575 357 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 S100A10P60903 97 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 VMO1Q7Z5L0 202 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 PCGF1Q9BSM1 259 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 MRPL20Q9BYC9 149 aaKnown RBP13.74□□□□□ -0.21
LMNA-216ENST00000496738 NMES1Q9C002 83 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 GAB2Q9UQC2 676 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 TMED3Q9Y3Q3 217 aa13.74□□□□□ -0.21
LMNA-216ENST00000496738 PTPN13Q12923 2485 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 M0R1W7 72 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 KRASP01116 189 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 AKIRIN2Q53H80 203 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 VPS13CQ709C8 3753 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 ABCA12Q86UK0 2595 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 C1orf196B1AJZ1 125 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 FOXH1O75593 365 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 CT45A6P0DMU7 189 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 CT45A5P0DMU8 189 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 CT45A7P0DMV0 189 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 VDAC1P21796 283 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 DSCR9P59020 149 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 RAB32Q13637 225 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 THAP6Q8TBB0 222 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
LMNA-216ENST00000496738 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms