RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 EHFQ9NZC4 300 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
CXCL12-208ENST00000496375 RBM7Q9Y580 266 aaKnown RBP11.2□□□□□ -0.62
CXCL12-208ENST00000496375 WSB1Q9Y6I7 421 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 LINC00473A8K010 186 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 G3V318 75 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 NBR2O15453 112 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 UPK1BO75841 260 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 SPDEFO95238 335 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 APOA2P02652 100 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 CD74P04233 296 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-208ENST00000496375 RRASP10301 218 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.62
CXCL12-208ENST00000496375 CNTFRP26992 372 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 HRH1P35367 487 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 RFX2P48378 723 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 LINC00205P59089 165 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 OXA1LQ15070 435 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 TMEM177Q53S58 311 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 GLDNQ6ZMI3 551 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-208ENST00000496375 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 DRAXINQ8NBI3 349 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-208ENST00000496375 ZBTB34Q8NCN2 500 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 OR11H1Q8NG94 326 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 RITA1Q96K30 269 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 PARP11Q9NR21 331 aa11.19□□□□□ -0.62
CXCL12-208ENST00000496375 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 PMP2P02689 132 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 FCER2P06734 321 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 HLA-DMAP28067 261 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
CXCL12-208ENST00000496375 IL18Q14116 193 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF66Q6ZN08 573 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 TMEM229BQ8NBD8 167 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 HSD17B10Q99714 261 aaKnown RBP11.18□□□□□ -0.62
CXCL12-208ENST00000496375 CCDC32Q9BV29 185 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 OR51J1Q9H342 316 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 GNB4Q9HAV0 340 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 VSIG4Q9Y279 399 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 V9GYH0 126 aa11.18□□□□□ -0.62
CXCL12-208ENST00000496375 IGHV7-81A0A0B4J1V7 117 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 I3L521 148 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 RRHO14718 337 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 KIAA0141Q14154 515 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-208ENST00000496375 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF491Q8N8L2 437 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 BVESQ8NE79 360 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 OR6F1Q8NGZ6 308 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF2Q9BSG1 426 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-208ENST00000496375 FXYD6Q9H0Q3 95 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 U3KQK5 164 aa11.17□□□□□ -0.62
CXCL12-208ENST00000496375 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 FABP12A6NFH5 140 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 H7C2Y5 167 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 IGLV2-23P01705 113 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 CD3DP04234 171 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 OR8U8P0C7N1 319 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 GNRHRP30968 328 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 LGALS7P47929 136 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 UCP3P55916 312 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 TAS2R19P59542 299 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 DEFA1P59665 94 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 DEFA3P59666 94 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 HERV-K104P61576 105 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 GNB1P62873 340 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
CXCL12-208ENST00000496375 RUNX1Q01196 453 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF79Q15937 498 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 RTL8BQ17RB0 113 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 ASPHD1Q5U4P2 390 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 KCTD9Q7L273 389 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 OSR1Q8TAX0 266 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-208ENST00000496375 SECTM1Q8WVN6 248 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 FLYWCH2Q96CP2 140 aaKnown RBP11.16□□□□□ -0.62
CXCL12-208ENST00000496375 TSNAXQ99598 290 aaKnown RBP11.16□□□□□ -0.62
CXCL12-208ENST00000496375 ASCL2Q99929 193 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 KIAA1456Q9P272 454 aa11.16□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-208ENST00000496375 DYNC2H1Q8NCM8 4307 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms