RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MEIKINA0A087WXM9 373 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 LOC100130705A0A1B0GUX0 176 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 ODAMA1E959 279 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 C17orf98A8MV24 154 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 CLDN34H7C241 214 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 K7EIL1 84 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 GEMIN2O14893 280 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 FADS2O95864 444 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1D-33P01593 117 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1-33P01594 117 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 MAS1P04201 325 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 RPSAP08865 295 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 PTHLHP12272 177 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 RCC1P18754 421 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 CFL1P23528 166 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 FCGR2BP31994 310 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 FCGR2CP31995 323 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 TGFBR1P36897 503 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 DDOSTP39656 456 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR3A3P47888 321 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 UBE2E1P51965 193 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 CAV3P56539 151 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 RAB25P57735 213 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR10A3P58181 314 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 RPS25P62851 125 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 GABPB1Q06547 395 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 IL24Q13007 206 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 P2RY14Q15391 338 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 SLC22A6Q4U2R8 563 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 PAN3Q58A45 887 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 TPTE2P1Q5T6R2 138 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF691Q5VV52 312 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 NCR3LG1Q68D85 454 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 SIGLEC15Q6ZMC9 328 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 Q6ZSR3 168 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 GDPD3Q7L5L3 318 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF573Q86YE8 665 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 GID4Q8IVV7 300 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 STHQ8IWL8 128 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 SUMF2Q8NBJ7 301 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR5A2Q8NGI9 324 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR52B4Q8NGK2 314 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR4C13Q8NGP0 309 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 CAPSLQ8WWF8 208 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 MYDGFQ969H8 173 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 PGLYRP3Q96LB9 341 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 GPER1Q99527 375 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 FAM103A1Q9BTL3 118 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM133Q9H2Q1 129 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 RNF167Q9H6Y7 350 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 BEX1Q9HBH7 125 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 HMG20AQ9NP66 347 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 EXOSC4Q9NPD3 245 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 INPP5EQ9NRR6 644 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 NECAP2Q9NVZ3 263 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 USE1Q9NZ43 259 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 OR1A1Q9P1Q5 309 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 WARS2Q9UGM6 360 aaKnown RBP2.15□□□□□ -2.07
PTCD3-218ENST00000493430 ING4Q9UNL4 249 aa2.15□□□□□ -2.07
PTCD3-218ENST00000493430 NACAE9PAV3 2078 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 A0A075B6Q4 140 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1D-8A0A087WSZ0 117 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 C12orf77C9JDV5 145 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 G3V318 75 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 C15orf65H3BRN8 121 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 J3QRK9 145 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 M0R1W7 72 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 CHEK1O14757 476 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SULT1B1O43704 296 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF254O75437 659 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 KBTBD11O94819 623 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 IGLV1-47P01700 117 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 MT-ND2P03891 347 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 GIG44P09565 113 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 UBCP0CG48 685 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 PPP1CCP36873 323 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 VDAC2P45880 294 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RBP2P50120 134 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 MNAT1P51948 309 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 BLVRAP53004 296 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ATP1B3P54709 279 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 CDC42P60953 191 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SNRPGP62308 76 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 UNC119Q13432 240 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RIPK1Q13546 671 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 HES1Q14469 280 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 HERPUD1Q15011 391 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 KISS1Q15726 138 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 HLA-DRB5Q30154 266 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RPL39P5Q59GN2 51 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 OR2B11Q5JQS5 317 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 HES5Q5TA89 166 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 FAM159AQ6UWV7 190 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 C6orf201Q7Z4U5 140 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 CROCCP3Q8IVE0 287 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF561Q8N587 486 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 JAGN1Q8N5M9 183 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ACBD7Q8N6N7 88 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SPERTQ8NA61 448 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 DRAXINQ8NBI3 349 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms