RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RLN1P04808 185 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 OPN1MW2P0DN77 364 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 OPN1MW3P0DN78 364 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 ETV6P41212 452 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 TMEM267Q0VDI3 215 aaPredicted RBP10.99□□□□□ -0.65
CCM2-217ENST00000492883 C2orf68Q2NKX9 166 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 TCTEX1D4Q5JR98 221 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 FAAP20Q6NZ36 180 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 TEX38Q6PEX7 206 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 IDO2Q6ZQW0 420 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 LHFPL1Q86WI0 220 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 NDUFA11Q86Y39 141 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 VKORC1L1Q8N0U8 176 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 TERB2Q8NHR7 220 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 A0A1W2PRX2 142 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 G3V318 75 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.656e-11■■■■■ 38.6
CCM2-217ENST00000492883 CREBL2O60519 120 aaPredicted RBP10.98□□□□□ -0.65
CCM2-217ENST00000492883 HPRT1P00492 218 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
CCM2-217ENST00000492883 PPP5CP53041 499 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 PJVKQ0ZLH3 352 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ZNF79Q15937 498 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ECSCRQ19T08 205 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 SSX9Q7RTT3 188 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 OR4C16Q8NGL9 310 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 GRPEL2Q8TAA5 225 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ZFAND1Q8TCF1 268 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 FAM103A1Q9BTL3 118 aaKnown RBP10.98□□□□□ -0.65
CCM2-217ENST00000492883 MCUBQ9NWR8 336 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 ZNF580Q9UK33 172 aa10.98□□□□□ -0.65
CCM2-217ENST00000492883 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
CCM2-217ENST00000492883 ACTL6BO94805 426 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 OR2A4O95047 310 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 PI3P19957 117 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 F2RP25116 425 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 AP3S2P59780 193 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 NDPQ00604 133 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 TNXAQ16473 311 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 PRSS8Q16651 343 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
CCM2-217ENST00000492883 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 TBC1D26Q86UD7 250 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 ZNF486Q96H40 463 aaPredicted RBP10.97□□□□□ -0.65
CCM2-217ENST00000492883 RHOVQ96L33 236 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 OR2A7Q96R45 310 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 PRRT1Q99946 306 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 FBXO7Q9Y3I1 522 aa10.97□□□□□ -0.65
CCM2-217ENST00000492883 A0A1W2PN81 502 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.65
CCM2-217ENST00000492883 ELANEP08246 267 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.65
CCM2-217ENST00000492883 NQO2P16083 231 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
CCM2-217ENST00000492883 CHRNA7P36544 502 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 ECI1P42126 302 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 LPAR6P43657 344 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 INPP1P49441 399 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 PIGPP57054 158 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 TAS2R31P59538 309 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 CFHR3Q02985 330 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 FOXE3Q13461 319 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 CNPY1Q3B7I2 92 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 TMEM65Q6PI78 240 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 MMD2Q8IY49 270 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 TCTEX1D1Q8N7M0 179 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 GDPD1Q8N9F7 314 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 DMBX1Q8NFW5 382 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 OR51S1Q8NGJ8 323 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 PHB2Q99623 299 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 SRRQ9GZT4 340 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
CCM2-217ENST00000492883 PLEKHA2Q9HB19 425 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 BATF3Q9NR55 127 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 SLC2A9Q9NRM0 540 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 ZFP57Q9NU63 452 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 COPZ2Q9P299 210 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 SCP2D1Q9UJQ7 156 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 NUBP2Q9Y5Y2 271 aa10.96□□□□□ -0.65
CCM2-217ENST00000492883 MPPED1O15442 326 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 S1PR2O95136 353 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 TSPAN15O95858 294 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 IGHG4P01861 327 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 CD40LGP29965 261 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
CCM2-217ENST00000492883 ERVK-16P61578 105 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 KLF9Q13886 244 aaPredicted RBP10.95□□□□□ -0.66
CCM2-217ENST00000492883 AKIRIN2Q53H80 203 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 ZNF57Q68EA5 555 aaPredicted RBP10.95□□□□□ -0.66
CCM2-217ENST00000492883 OR13C8Q8NGS7 320 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms