RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
SGMS1-204ENST00000492601 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
SGMS1-204ENST00000492601 FCGR1BQ92637 280 aa13.19□□□□□ -0.3
SGMS1-204ENST00000492601 DCSTAMPQ9H295 470 aa13.19□□□□□ -0.3
SGMS1-204ENST00000492601 DYNC2H1Q8NCM8 4307 aaKnown RBP13.18□□□□□ -0.3
SGMS1-204ENST00000492601 SSX5O60225 188 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 CLEC2LP0C7M8 214 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 SAA1P0DJI8 122 aaPredicted RBP13.18□□□□□ -0.3
SGMS1-204ENST00000492601 SDC2P34741 201 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 CNIH2Q6PI25 160 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 Q9H521 79 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 RNF167Q9H6Y7 350 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 RHBDL2Q9NX52 303 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
SGMS1-204ENST00000492601 PRELID3BQ9Y3B1 194 aa13.18□□□□□ -0.3
SGMS1-204ENST00000492601 SCGNO76038 276 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 ACTL6BO94805 426 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 IGLV2-14P01704 120 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 CD36P16671 472 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 RHOGP84095 191 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 CDK10Q15131 360 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 RPEL1Q2QD12 228 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 IL34Q6ZMJ4 242 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 VKORC1L1Q8N0U8 176 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 Q8N1Y9 231 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 AKIP1Q9NQ31 210 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 ANXA10Q9UJ72 324 aa13.17□□□□□ -0.3
SGMS1-204ENST00000492601 MRPS7Q9Y2R9 242 aaKnown RBP13.17□□□□□ -0.3
SGMS1-204ENST00000492601 LOC100506127A0A0U1RQW1 187 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 IGHV4-30-4P0DP06 118 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 ZNF45Q02386 682 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 MMD2Q8IY49 270 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 OR5H6Q8NGV6 325 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 GPHA2Q96T91 129 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
SGMS1-204ENST00000492601 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 SPATA2Q9UM82 520 aa13.16□□□□□ -0.3
SGMS1-204ENST00000492601 TRAV18A0A075B6X5 111 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
SGMS1-204ENST00000492601 SLC22A5O76082 557 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 PTHLHP12272 177 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 ATP5G2Q06055 141 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
SGMS1-204ENST00000492601 IDNKQ5T6J7 187 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 SNAPC3Q92966 411 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 SPIN2AQ99865 258 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 SPIN2BQ9BPZ2 258 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 TAS2R8Q9NYW2 309 aa13.15□□□□□ -0.3
SGMS1-204ENST00000492601 HMX3A6NHT5 357 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 CSN3P07498 182 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 ARPC4P59998 168 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 NEDD8Q15843 81 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 GVQW1Q8N7I0 195 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 OR4S2Q8NH73 311 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 MUC7Q8TAX7 377 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 SLC25A38Q96DW6 304 aa13.14□□□□□ -0.31
SGMS1-204ENST00000492601 HSD17B10Q99714 261 aaKnown RBP13.14□□□□□ -0.31
SGMS1-204ENST00000492601 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 H0Y980 276 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 BMPR1BO00238 502 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 OR2J3O76001 311 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 FCER2P06734 321 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 BRWD1-AS2P59051 145 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 EIF4EBP1Q13541 118 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-204ENST00000492601 C19orf35Q6ZS72 473 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 MFSD4AQ8N468 514 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 BEST4Q8NFU0 473 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 SECTM1Q8WVN6 248 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 FYTTD1Q96QD9 318 aaKnown RBP13.13□□□□□ -0.31
SGMS1-204ENST00000492601 C19orf73Q9NVV2 129 aa13.13□□□□□ -0.31
SGMS1-204ENST00000492601 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 TNFSF12O43508 249 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 KBTBD11O94819 623 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 OR2A4O95047 310 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 FCGR2CP31995 323 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 SSX9Q7RTT3 188 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 OR2A7Q96R45 310 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 CCL28Q9NRJ3 127 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 SACSQ9NZJ4 4579 aa13.12□□□□□ -0.31
SGMS1-204ENST00000492601 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 CSMD3Q7Z407 3707 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 PPP5D1E7EU14 171 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 E7EUB6 86 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-204ENST00000492601 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms