RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	TRAV14DV4	A0A0A6YYC5	116 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	MARCH11	A6NNE9	402 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423		H7C2Y5	167 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	KRAS	P01116	189 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	FSHB	P01225	129 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	SLC25A6	P12236	298 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	EPHA1	P21709	976 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	SSX2	Q16385	188 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	FBLN7	Q53RD9	439 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	GPR157	Q5UAW9	335 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	FAM219A	Q8IW50	185 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR2T35	Q8NGX2	323 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	RNASE11	Q8TAA1	199 aa	Known RBP	11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	PPP1R14B	Q96C90	147 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	SPIN2A	Q99865	258 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423	SPIN2B	Q9BPZ2	258 aa		11.98	□□□□□ -0.49
COPS7B-222	ENST00000492423		A0A1B0GU03	582 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	SRRM4	A7MD48	611 aa	Known RBP	11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	PITX3	O75364	302 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	ATG12	O94817	140 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	VENTX	O95231	258 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGLV2-23	P01705	113 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR9G9	P0C7N8	305 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	NQO2	P16083	231 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	MC5R	P33032	325 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	RAB13	P51153	203 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	BRD3OS	Q6XYD6	125 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	SSX9	Q7RTT3	188 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	VKORC1L1	Q8N0U8	176 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	OSR1	Q8TAX0	266 aa	Predicted RBP	11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	MALSU1	Q96EH3	234 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	RRNAD1	Q96FB5	475 aa	Known RBP	11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	HARBI1	Q96MB7	349 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	TMEM140	Q9NV12	185 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	CACNG5	Q9UF02	275 aa		11.97	□□□□□ -0.49
COPS7B-222	ENST00000492423	SHOX	O15266	292 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	C1QB	P02746	253 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	IL6R	P08887	468 aa	Predicted RBP	11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	CD1B	P29016	333 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	ERVK-16	P61578	105 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	CYCS	P99999	105 aa	Known RBP	11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	RAB32	Q13637	225 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	SMCO1	Q147U7	214 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	THOC7	Q6I9Y2	204 aa	Known RBP	11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	CCDC144NL	Q6NUI1	221 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	H2BFWT	Q7Z2G1	175 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	DMBX1	Q8NFW5	382 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR4C13	Q8NGP0	309 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	PPP1R1C	Q8WVI7	109 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	FLYWCH2	Q96CP2	140 aa	Known RBP	11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	RITA1	Q96K30	269 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	RHOV	Q96L33	236 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	GSKIP	Q9P0R6	139 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	ABCA1	O95477	2261 aa		11.96	□□□□□ -0.49
COPS7B-222	ENST00000492423	TRAV3	A0A0B4J244	114 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423		A0A0U1RQK1	487 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	FAM90A9P	A6NNJ1	464 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423		H0YIZ8	118 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	MPC2	O95563	127 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	HRAS	P01112	189 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	SAA1	P0DJI8	122 aa	Predicted RBP	11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	RPS16	P62249	146 aa	Known RBP	11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	LRRC37A5P	Q49AS3	106 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	OR4A47	Q6IF82	309 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	PUSL1	Q8N0Z8	303 aa	Known RBP	11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	OR11H4	Q8NGC9	324 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	COA4	Q9NYJ1	87 aa		11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423	SOX21	Q9Y651	276 aa	Predicted RBP	11.95	□□□□□ -0.5
COPS7B-222	ENST00000492423		K7EPK0	472 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	MBP	P02686	304 aa	Predicted RBP	11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	SNRNP70	P08621	437 aa	Known RBP	11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	CNTFR	P26992	372 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	RELB	Q01201	579 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	EBI3	Q14213	229 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	ZFP69	Q49AA0	526 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	FAM71E2	Q8N5Q1	922 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	OR1S1	Q8NH92	325 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	C11orf1	Q9H5F2	150 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	BET1L	Q9NYM9	111 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	RCL1	Q9Y2P8	373 aa	Known RBP	11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	NSG2	Q9Y328	171 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	CSMD2	Q7Z408	3487 aa		11.94	□□□□□ -0.5
COPS7B-222	ENST00000492423	UPK2	O00526	184 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	CD5L	O43866	347 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	NXPH3	O95157	252 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	SCGB1D2	O95969	90 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	IGKV1D-33	P01593	117 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	IGKV1-33	P01594	117 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	CRYGB	P07316	175 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	CD24	P25063	80 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	PSMB6	P28072	239 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	NKX2-1	P43699	371 aa	Predicted RBP	11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	ARHGDIB	P52566	201 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	RIPPLY3	P57055	190 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	OR2B8P	P59922	312 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	ID3	Q02535	119 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	AARD	Q4LEZ3	155 aa		11.93	□□□□□ -0.5
COPS7B-222	ENST00000492423	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms