RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TRGV3P03979 118 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 HSPB1P04792 205 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 LGALS1P09382 135 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 MYOD1P15172 320 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 SPNP16150 400 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TALDO1P37837 337 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 BRWD1-AS2P59051 145 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TPPP2P59282 170 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TMEM267Q0VDI3 215 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 NEDD8Q15843 81 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TMEM177Q53S58 311 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 OR2B11Q5JQS5 317 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 IDO2Q6ZQW0 420 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 C19orf35Q6ZS72 473 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 OVCH2Q7RTZ1 564 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 PDPNQ86YL7 162 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 GVQW1Q8N7I0 195 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 LGALS14Q8TCE9 139 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 ARPC1AQ92747 370 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TSNAXQ99598 290 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 CENPOQ9BU64 300 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 YTHDF1Q9BYJ9 559 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 GPR61Q9BZJ8 451 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 GHITMQ9H3K2 345 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF355PQ9NSJ1 428 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 STUB1Q9UNE7 303 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 SSR3Q9UNL2 185 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 RBM7Q9Y580 266 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TRAV18A0A075B6X5 111 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 LOC100506127A0A0U1RQW1 187 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 METTL21EPA6NDL7 271 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 MSGN1A6NI15 193 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 TRIM64CA6NLI5 447 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SHOXO15266 292 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 RAMP3O60896 148 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SAP30O75446 220 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 CNIH1O95406 144 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 CRYZL1O95825 349 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 HLA-DQB1P01920 261 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 APOA2P02652 100 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 OR8U8P0C7N1 319 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 GALP22466 123 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 LGALS7P47929 136 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SERPINB10P48595 397 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 MRPS15P82914 257 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 EIF4EBP1Q13541 118 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SRSF7Q16629 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 C10orf55Q5SWW7 151 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 IDNKQ5T6J7 187 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 HACD4Q5VWC8 232 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SFXN4Q6P4A7 337 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF773Q6PK81 442 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 Q6ZS49 121 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SBSPONQ8IVN8 264 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 VKORC1L1Q8N0U8 176 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 POC5Q8NA72 575 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 SLC25A38Q96DW6 304 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 HARBI1Q96MB7 349 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 GINS4Q9BRT9 223 aa5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF256Q9Y2P7 627 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-208ENST00000490653 A0A1B0GW64 132 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 MEIS3P1A6NDR6 274 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 HMX3A6NHT5 357 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 FCGR3BO75015 233 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 TUSC2O75896 110 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 SPDEFO95238 335 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 CD36P16671 472 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 EDN2P20800 178 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 DTYMKP23919 212 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 LSM3P62310 102 aaKnown RBP5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF45Q02386 682 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 DYRK1AQ13627 763 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 TNXAQ16473 311 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 PRSS8Q16651 343 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 CNIH2Q6PI25 160 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 IL34Q6ZMJ4 242 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 TPRA1Q86W33 373 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 TCTEX1D1Q8N7M0 179 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 TEX45Q8NA69 505 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF430Q9H8G1 570 aaPredicted RBP5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 CCL28Q9NRJ3 127 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 RHBDL2Q9NX52 303 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 SPATA2Q9UM82 520 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 RBMX2Q9Y388 322 aaKnown RBP5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 OR2W1Q9Y3N9 320 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 SELENOKQ9Y6D0 94 aa5.59□□□□□ -1.51
PRPF4B-208ENST00000490653 STARD9Q9P2P6 4700 aa5.59□□□□□ -1.52
PRPF4B-208ENST00000490653 TRAV3A0A0B4J244 114 aa5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 IZUMO1RA6ND01 250 aa5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 TNFSF12O43508 249 aa5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 IL6RP08887 468 aaPredicted RBP5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 SAA1P0DJI8 122 aaPredicted RBP5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 GP9P14770 177 aa5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 AADACP22760 399 aa5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 RPS19P39019 145 aaKnown RBP5.58□□□□□ -1.52
PRPF4B-208ENST00000490653 GNG2P59768 71 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms