RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 CREBL2O60519 120 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-210ENST00000489961 HPRT1P00492 218 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CTSDP07339 412 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-210ENST00000489961 PI3P19957 117 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 BRWD1-AS2P59051 145 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 UBE2KP61086 200 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF846Q147U1 533 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CENPVQ7Z7K6 275 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-210ENST00000489961 PPP1R27Q86WC6 154 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CHPT1Q8WUD6 406 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 MRGPRFQ96AM1 343 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CLCC1Q96S66 551 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 HSPB9Q9BQS6 159 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CCDC32Q9BV29 185 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 GON7Q9BXV9 100 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 PLEKHA2Q9HB19 425 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 FAM212BQ9NTI7 297 aaPredicted RBP8.6□□□□□ -1.03
VPS13D-210ENST00000489961 COMMD9Q9P000 198 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 COL6A5A8TX70 2615 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 IGHV7-81A0A0B4J1V7 117 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 SRRM4A7MD48 611 aaKnown RBP8.59□□□□□ -1.03
VPS13D-210ENST00000489961 MPPED1O15442 326 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 RAMP3O60896 148 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 CA2P00918 260 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 CRYGBP07316 175 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 SAA1P0DJI8 122 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-210ENST00000489961 NQO2P16083 231 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 CD40LGP29965 261 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 TAS2R31P59538 309 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 ERVK-16P61578 105 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 SLC35B1P78383 322 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 STPG2Q8N412 459 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 ABHD5Q8WTS1 349 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 RHOVQ96L33 236 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 C7orf50Q9BRJ6 194 aaKnown RBP8.59□□□□□ -1.03
VPS13D-210ENST00000489961 OR51J1Q9H342 316 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 GPR132Q9UNW8 380 aa8.59□□□□□ -1.03
VPS13D-210ENST00000489961 TEX13DA0A0J9YY54 714 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-210ENST00000489961 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 LINC00854A0A1B0GVQ3 168 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 PSMB11A5LHX3 300 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 LINC01548A6NM66 108 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 H0Y980 276 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 FCN1O00602 326 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 ATP6V0E1O15342 81 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 B3GALNT1O75752 331 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 ACTL6BO94805 426 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 OR2A4O95047 310 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 S1PR2O95136 353 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 CNIH1O95406 144 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 IGF1P05019 195 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 SERPINE2P07093 398 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 VDAC1P21796 283 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 LPAR6P43657 344 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 GNB1P62873 340 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 CX3CL1P78423 397 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 SSX9Q7RTT3 188 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 MMD2Q8IY49 270 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 DMBX1Q8NFW5 382 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 OR5AU1Q8NGC0 362 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 R3HDM4Q96D70 268 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 NOL4LQ96MY1 436 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-210ENST00000489961 OR2A7Q96R45 310 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 SLC25A21Q9BQT8 299 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-210ENST00000489961 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
VPS13D-210ENST00000489961 FBXO24O75426 580 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 KBTBD11O94819 623 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 RPA2P15927 270 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 TMEM267Q0VDI3 215 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-210ENST00000489961 PJVKQ0ZLH3 352 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 FXYD3Q14802 87 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 RBMS2Q15434 407 aaKnown RBP8.57□□□□□ -1.04
VPS13D-210ENST00000489961 TNXAQ16473 311 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 POU2AF1Q16633 256 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 PRSS8Q16651 343 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 ZNF585BQ52M93 769 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 OR4A47Q6IF82 309 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 PUSL1Q8N0Z8 303 aaKnown RBP8.57□□□□□ -1.04
VPS13D-210ENST00000489961 OR4X2Q8NGF9 303 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 OR4A5Q8NH83 315 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 TMEM167AQ8TBQ9 72 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 CITED1Q99966 193 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 RTBDNQ9BSG5 229 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-210ENST00000489961 C5orf66Q9H5L9 145 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 VSIG4Q9Y279 399 aa8.57□□□□□ -1.04
VPS13D-210ENST00000489961 TRAV41A0A0B4J266 112 aa8.56□□□□□ -1.04
VPS13D-210ENST00000489961 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
VPS13D-210ENST00000489961 MARCH11A6NNE9 402 aa8.56□□□□□ -1.04
VPS13D-210ENST00000489961 ATG12O94817 140 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms