RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
LMX1A-204ENST00000489443 SOX15O60248 233 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 SAA1P0DJI8 122 aaPredicted RBP12.29□□□□□ -0.44
LMX1A-204ENST00000489443 SLC6A1P30531 599 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 GNRHRP30968 328 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 BRWD1-AS2P59051 145 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 SSBP2P81877 361 aaPredicted RBP12.29□□□□□ -0.44
LMX1A-204ENST00000489443 DEFA6Q01524 100 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 PRSS8Q16651 343 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 AKIRIN2Q53H80 203 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 ETV3LQ6ZN32 361 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 C15orf40Q8WUR7 153 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 DIRAS2Q96HU8 199 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
LMX1A-204ENST00000489443 M0QYG6 137 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 TPPPO94811 219 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 KIR2DS2P43631 304 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 RAB9AP51151 201 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 CATR1Q13166 79 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 TNXAQ16473 311 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 MRGPRG-AS1Q2M3A8 158 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 DEFB136Q30KP8 78 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 WFDC9Q8NEX5 89 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 FCAMRQ8WWV6 532 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 RAX2Q96IS3 184 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 MS4A10Q96PG2 267 aa12.28□□□□□ -0.44
LMX1A-204ENST00000489443 CCL24O00175 119 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 RAMP3O60896 148 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 IFNA6P05013 189 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 CD40LGP29965 261 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 MYCNOSP40205 109 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 DGCR2P98153 550 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 KIAA0141Q14154 515 aaPredicted RBP12.27□□□□□ -0.45
LMX1A-204ENST00000489443 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 SSX9Q7RTT3 188 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.45
LMX1A-204ENST00000489443 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 OR5T1Q8NG75 326 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 MCFD2Q8NI22 146 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 OR5B12Q96R08 314 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 PHB2Q99623 299 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 SLIRPQ9GZT3 109 aaKnown RBP12.27□□□□□ -0.45
LMX1A-204ENST00000489443 FXYD6Q9H0Q3 95 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 ZNF430Q9H8G1 570 aaPredicted RBP12.27□□□□□ -0.45
LMX1A-204ENST00000489443 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 MTFP1Q9UDX5 166 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 VSIG4Q9Y279 399 aa12.27□□□□□ -0.45
LMX1A-204ENST00000489443 MSGN1A6NI15 193 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 ACTL6BO94805 426 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 HRASP01112 189 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 CD3DP04234 171 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 APELAP0DMC3 54 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 IGLL1P15814 213 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 RAB25P57735 213 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 IL18Q14116 193 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 RNASE10Q5GAN6 216 aaKnown RBP12.26□□□□□ -0.45
LMX1A-204ENST00000489443 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 MMD2Q8IY49 270 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 CMTM1Q8IZ96 169 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 POC5Q8NA72 575 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 OR5M8Q8NGP6 311 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 MYOZ3Q8TDC0 251 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 RHOVQ96L33 236 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 UBE2E2Q96LR5 201 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 TINAGL1Q9GZM7 467 aaPredicted RBP12.26□□□□□ -0.45
LMX1A-204ENST00000489443 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
LMX1A-204ENST00000489443 GABARAPH6UMI1 98 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 GPR31O00270 319 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
LMX1A-204ENST00000489443 CREBL2O60519 120 aaPredicted RBP12.25□□□□□ -0.45
LMX1A-204ENST00000489443 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
LMX1A-204ENST00000489443 OR2A4O95047 310 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 RLN1P04808 185 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 PHLDA2Q53GA4 152 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 VAX1Q5SQQ9 334 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 VSTM2AQ8TAG5 236 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 OR2A7Q96R45 310 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 P2RX4Q99571 388 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
LMX1A-204ENST00000489443 TGP01266 2768 aa12.25□□□□□ -0.45
LMX1A-204ENST00000489443 MPPED1O15442 326 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 KBTBD11O94819 623 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 HPRT1P00492 218 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 TRGV3P03979 118 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 TNFSF8P32971 234 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 TPPP2P59282 170 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
LMX1A-204ENST00000489443 C10orf55Q5SWW7 151 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms