RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RPS4Y2Q8TD47 263 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 SLC35B4Q969S0 331 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 ROPN1LQ96C74 230 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 MIEN1Q9BRT3 115 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 PECRQ9BY49 303 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 CXorf21Q9HAI6 301 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.41□□□□□ -2.18
RFC4-213ENST00000489028 ANGPT4Q9Y264 503 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 COL18A1P39060 1754 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 DSCAML1Q8TD84 2053 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 A0A087WUU8 490 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 TGIF2-C20orf24A0A0A6YYL0 155 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 CLDN24A6NM45 220 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 OR5K4A6NMS3 321 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 PSMD12O00232 456 aaPredicted RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 KPNA3O00505 521 aaPredicted RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 TCRBP04435 133 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 KCNE1P15382 129 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 CCL1P22362 96 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 HAAOP46952 286 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 GZMMP51124 257 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 RBM11P57052 281 aaKnown RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 FXYD7P58549 80 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 TAS2R20P59543 309 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 PSME3P61289 254 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 CCL7P80098 99 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 MRPS25P82663 173 aaKnown RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 AKR1C1Q04828 323 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 SRSF6Q13247 344 aaKnown RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 GPHB5Q86YW7 130 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 UMODL1-AS1Q8N2C9 162 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 LRRC25Q8N386 305 aaPredicted RBP1.4□□□□□ -2.19
RFC4-213ENST00000489028 CLDN22Q8N7P3 220 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 CNEP1R1Q8N9A8 125 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 OR4C16Q8NGL9 310 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 OR5C1Q8NGR4 320 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 LHFPL5Q8TAF8 219 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 ANKRD7Q92527 254 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 DCUN1D1Q96GG9 259 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 SFRP2Q96HF1 295 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 TUBA4BQ9H853 241 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 PSTPIP2Q9H939 334 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 PSORS1C2Q9UIG4 136 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 ATAD5Q96QE3 1844 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 DCCP43146 1447 aa1.4□□□□□ -2.19
RFC4-213ENST00000489028 NACADO15069 1562 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 IGHV3-15A0A0B4J1V0 119 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 VPS37CA5D8V6 355 aaPredicted RBP1.39□□□□□ -2.19
RFC4-213ENST00000489028 TXNDC9O14530 226 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 ZNF73O43830 326 aaPredicted RBP1.39□□□□□ -2.19
RFC4-213ENST00000489028 NPYP01303 97 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 UCHL1P09936 223 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 CTXN2P0C2S0 81 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 GZMHP20718 246 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 CD24P25063 80 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 HOXA6P31267 233 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 XCL1P47992 114 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 AP1S1P61966 158 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 LSM6P62312 80 aaKnown RBP1.39□□□□□ -2.19
RFC4-213ENST00000489028 TNFAIP6P98066 277 aaPredicted RBP1.39□□□□□ -2.19
RFC4-213ENST00000489028 LGALS9BQ3B8N2 356 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 GLT8D1Q68CQ7 371 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 LGALS9CQ6DKI2 356 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 SMARCD3Q6STE5 483 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 SPATA12Q7Z6I5 190 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 C20orf196Q8IYI0 205 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 TBC1D19Q8N5T2 526 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 TMEM86BQ8N661 226 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 OR1L8Q8NGR8 309 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 SGMS2Q8NHU3 365 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 CNBD2Q96M20 576 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 C20orf166-AS1Q96NR2 134 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 NMNAT3Q96T66 252 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 PAIP2Q9BPZ3 127 aaKnown RBP1.39□□□□□ -2.19
RFC4-213ENST00000489028 C16orf95Q9H693 158 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 XAGE1AQ9HD64 81 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 TAAR3PQ9P1P4 343 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 PRELID1Q9Y255 219 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 COQ4Q9Y3A0 265 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 ZNF337Q9Y3M9 751 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 MINOS1-NBL1R4GNA1 71 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 MUC6Q6W4X9 2439 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 OTOFQ9HC10 1997 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 KMT2EQ8IZD2 1858 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 NUP160Q12769 1436 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 ADAMTSL1Q8N6G6 1762 aa1.39□□□□□ -2.19
RFC4-213ENST00000489028 A0A0J9YX75 114 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 A0A1W2PQD3 144 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 PQLC2LA1A4F0 135 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 ZNF878C9JN71 531 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 LST1O00453 97 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 TRAPPC3O43617 180 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 CHP2O43745 196 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 IFNA6P05013 189 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 FGF6P10767 208 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 CBR1P16152 277 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 BLVRBP30043 206 aaPredicted RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 OR4D2P58180 307 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms