RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 SSX9Q7RTT3 188 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 ABHD5Q8WTS1 349 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 RNF5Q99942 180 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 WNT10AQ9GZT5 417 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 SLC2A8Q9NY64 477 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 FBXO7Q9Y3I1 522 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 VWFP04275 2813 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 KCNAB3O43448 404 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 CRYGBP07316 175 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 RPA2P15927 270 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 F2RP25116 425 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 S100GP29377 79 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 LGALS7P47929 136 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 UBE2KP61086 200 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 RND3P61587 244 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 SSBP2P81877 361 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 ECSCRQ19T08 205 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 MRGPRG-AS1Q2M3A8 158 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 LIN54Q6MZP7 749 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 LINC00299Q6ZSB3 139 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 FOXRED2Q8IWF2 684 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 POC5Q8NA72 575 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 WIPF2Q8TF74 440 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF486Q96H40 463 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 FAM103A1Q9BTL3 118 aaKnown RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF747Q9BV97 191 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 OR51J1Q9H342 316 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 C5orf66Q9H5L9 145 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 SCP2D1Q9UJQ7 156 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
UBE4B-210ENST00000488228 VSIG4Q9Y279 399 aa8.71□□□□□ -1.02
UBE4B-210ENST00000488228 WNK1Q9H4A3 2382 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 AP4M1O00189 453 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ARPC1BO15143 372 aaKnown RBP8.7□□□□□ -1.02
UBE4B-210ENST00000488228 MPPED1O15442 326 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 CD40LGP29965 261 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ECI1P42126 302 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 CCR6P51684 374 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 CX3CL1P78423 397 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 SURF2Q15527 256 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-210ENST00000488228 C10orf55Q5SWW7 151 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF329Q86UD4 541 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 PPP1R27Q86WC6 154 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 STPG2Q8N412 459 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 GRPEL2Q8TAA5 225 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ZFAND1Q8TCF1 268 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 S100ZQ8WXG8 99 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ARPC1AQ92747 370 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 R3HDM4Q96D70 268 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 RHOVQ96L33 236 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 TP53RKQ96S44 253 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF430Q9H8G1 570 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-210ENST00000488228 COMMD9Q9P000 198 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 COPZ2Q9P299 210 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 WSB1Q9Y6I7 421 aa8.7□□□□□ -1.02
UBE4B-210ENST00000488228 PSMB11A5LHX3 300 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 G3V318 75 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 H0Y980 276 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 FBXO24O75426 580 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 KBTBD11O94819 623 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 HPRT1P00492 218 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 CD28P10747 220 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 BTCP35070 178 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 LPAR6P43657 344 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TAS2R31P59538 309 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF846Q147U1 533 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TNXAQ16473 311 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 PRSS8Q16651 343 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF585BQ52M93 769 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 CCDC71LQ8N9Z2 235 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TEX45Q8NA69 505 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 ADAD2Q8NCV1 583 aaKnown RBP8.69□□□□□ -1.02
UBE4B-210ENST00000488228 OR5AU1Q8NGC0 362 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 CD300LFQ8TDQ1 290 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TMEM230Q96A57 120 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 CITED1Q99966 193 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 CCDC32Q9BV29 185 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
UBE4B-210ENST00000488228 PLEKHA2Q9HB19 425 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TMEM140Q9NV12 185 aa8.69□□□□□ -1.02
UBE4B-210ENST00000488228 TRAV3A0A0B4J244 114 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 MARCH11A6NNE9 402 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 OR2A4O95047 310 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 CNIH1O95406 144 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 HRASP01112 189 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 IGKV1-39P01597 117 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 IGKV1D-39P04432 117 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 IGF1P05019 195 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 APELAP0DMC3 54 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 MYOD1P15172 320 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 NQO2P16083 231 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 VDAC1P21796 283 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 G6PCP35575 357 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms