RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 MRPS11P82912 194 aaKnown RBP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 RELBQ01201 579 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 BSPH1Q075Z2 132 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 ADIPOQQ15848 244 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 ZNF726P1Q15940 193 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 LTC4SQ16873 150 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 CT45A1Q5HYN5 189 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 C22orf34Q6ZV56 151 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 ZGRF1Q86YA3 2104 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 CYB561D1Q8N8Q1 229 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 C8orf31Q8N9H6 132 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 CT45A3Q8NHU0 189 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 RND1Q92730 232 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 HIST1H2BAQ96A08 127 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 RAB39BQ96DA2 213 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 VKORC1Q9BQB6 163 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 QTRT1Q9BXR0 403 aaKnown RBP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 MANBALQ9NQG1 85 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 KCNIP2Q9NS61 270 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 SLC39A9Q9NUM3 307 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 TMEM140Q9NV12 185 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 RPUSD1Q9UJJ7 312 aaKnown RBP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 PRELID1Q9Y255 219 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 FOXA2Q9Y261 457 aaPredicted RBP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 WDR83OSQ9Y284 106 aa6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 KLF2Q9Y5W3 355 aaPredicted RBP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 PUS1Q9Y606 427 aaKnown RBP eCLIP6.09□□□□□ -1.43
SHROOM3-206ENST00000484236 GVINP1Q7Z2Y8 2422 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 DOCK11Q5JSL3 2073 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PLCE1Q9P212 2302 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PPIAL4EA0A075B759 164 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 SAA2-SAA4A0A096LPE2 208 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 C15orf61A6NNL5 157 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 C1orf196B1AJZ1 125 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 FNDC10F2Z333 226 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PPIAL4DF5H284 164 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 GYPAP02724 150 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 IFNA4P05014 189 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 SAA2P0DJI9 122 aaPredicted RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PPIAL4FP0DN26 164 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 HOXA1P49639 335 aaPredicted RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 HSPE1P61604 102 aaKnown RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 EFNB3Q15768 340 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 ACOT6Q3I5F7 207 aaPredicted RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 RPL39P5Q59GN2 51 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 FAM71F2Q6NXP2 309 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 LCN15Q6UWW0 184 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 SLC25A48Q6ZT89 311 aaKnown RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 TCF23Q7RTU1 214 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 C1QL4Q86Z23 238 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 RPP25LQ8N5L8 163 aaKnown RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 OR10G9Q8NGN4 311 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 OR10G7Q8NGN6 311 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 CA5BP1Q8WTZ4 195 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 RAB1CQ92928 201 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 LHX4Q969G2 390 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 SNRNP40Q96DI7 357 aaKnown RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 CCL13Q99616 98 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 NPCDR1Q9BY65 106 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 MS4A5Q9H3V2 200 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 VSIRQ9H7M9 311 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 HEYLQ9NQ87 328 aaPredicted RBP6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 TMEM242Q9NWH2 141 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 FKBP11Q9NYL4 201 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 GNG13Q9P2W3 67 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PRNDQ9UKY0 176 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 ZNF257Q9Y2Q1 563 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 PPIAL4AQ9Y536 164 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 MUC6Q6W4X9 2439 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 CEP250Q9BV73 2442 aa6.08□□□□□ -1.44
SHROOM3-206ENST00000484236 SMCO3A2RU48 225 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 SEC14L6B5MCN3 397 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 TMEM250H0YL14 139 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 TMEM178BH3BS89 294 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 TNFRSF13BO14836 293 aaPredicted RBP6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 SLC31A2O15432 143 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 TGOLN2O43493 480 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 OR2C1O95371 312 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 IFNA10P01566 189 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 IL6RP08887 468 aaPredicted RBP6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 SELLP14151 372 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 RAB5AP20339 215 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 AGAP20933 346 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 CD1BP29016 333 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 OPRK1P41145 380 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 PSMB3P49720 205 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 CASP6P55212 293 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 LINC00205P59089 165 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 TLE1Q04724 770 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 RTL8BQ17RB0 113 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 AKIRIN2Q53H80 203 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 FFAR4Q5NUL3 377 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 FAM201AQ5SY85 155 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 NCMAPQ5T1S8 102 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 FAM90A2PQ658T7 463 aa6.07□□□□□ -1.44
SHROOM3-206ENST00000484236 ACSM6Q6P461 480 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms