RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 G3V318 75 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 RBFOX2O43251 390 aaKnown RBP eCLIP16.41■□□□□ 0.22
SEC13-217ENST00000482647 TSPAN15O95858 294 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 HRASP01112 189 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 IGHG4P01861 327 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 ELANEP08246 267 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 UCP3P55916 312 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 GNB1P62873 340 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 NDPQ00604 133 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 PJVKQ0ZLH3 352 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 FOXE3Q13461 319 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 FXYD3Q14802 87 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 MEF2DQ14814 521 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 OR51H1Q8NH63 302 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 AIFM2Q9BRQ8 373 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 RSRP1Q9BUV0 290 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 CREBL2O60519 120 aaPredicted RBP16.4■□□□□ 0.22
SEC13-217ENST00000482647 RAMP3O60896 148 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 EGR2P11161 476 aaPredicted RBP16.4■□□□□ 0.22
SEC13-217ENST00000482647 CXorf66Q5JRM2 361 aaPredicted RBP16.4■□□□□ 0.22
SEC13-217ENST00000482647 FOXB2Q5VYV0 432 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 OR4D10Q8NGI6 311 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 VSTM2AQ8TAG5 236 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 FAM110DQ8TAY7 271 aaPredicted RBP16.4■□□□□ 0.22
SEC13-217ENST00000482647 ARPC1AQ92747 370 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 NUBP2Q9Y5Y2 271 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 FBN3Q75N90 2809 aa16.4■□□□□ 0.22
SEC13-217ENST00000482647 TET2Q6N021 2002 aaPredicted RBP16.4■□□□□ 0.22
SEC13-217ENST00000482647 RLN1P04808 185 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 AKAIN1P0CW23 69 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 SAA1P0DJI8 122 aaPredicted RBP16.39■□□□□ 0.21
SEC13-217ENST00000482647 PTBP1P26599 531 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEC13-217ENST00000482647 PPIFP30405 207 aaKnown RBP16.39■□□□□ 0.21
SEC13-217ENST00000482647 CRIP2P52943 208 aaPredicted RBP16.39■□□□□ 0.21
SEC13-217ENST00000482647 PRSS8Q16651 343 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 ECSCRQ19T08 205 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 PYDC2Q56P42 97 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 SPANXN2Q5MJ10 180 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 IDO2Q6ZQW0 420 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 CCDC190Q86UF4 302 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 LHFPL1Q86WI0 220 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 TCTEX1D1Q8N7M0 179 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 RNF152Q8N8N0 203 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 MINDY2Q8NBR6 621 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 TERB2Q8NHR7 220 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 GRPEL2Q8TAA5 225 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 R3HDM4Q96D70 268 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 THAP7Q9BT49 309 aaPredicted RBP16.39■□□□□ 0.21
SEC13-217ENST00000482647 FBXO7Q9Y3I1 522 aa16.39■□□□□ 0.21
SEC13-217ENST00000482647 DISC1C4P0D8 188 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 ARPC1BO15143 372 aaKnown RBP16.38■□□□□ 0.21
SEC13-217ENST00000482647 OR2A4O95047 310 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 HPRT1P00492 218 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 RPL23AP62750 156 aaKnown RBP16.38■□□□□ 0.21
SEC13-217ENST00000482647 PHLDA2Q53GA4 152 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 AKIRIN2Q53H80 203 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 TMEM65Q6PI78 240 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 VKORC1L1Q8N0U8 176 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 OR6Q1Q8NGQ2 317 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 RHOVQ96L33 236 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 OR2A7Q96R45 310 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 FAM103A1Q9BTL3 118 aaKnown RBP16.38■□□□□ 0.21
SEC13-217ENST00000482647 FOXA2Q9Y261 457 aaPredicted RBP16.38■□□□□ 0.21
SEC13-217ENST00000482647 V9GYH0 126 aa16.38■□□□□ 0.21
SEC13-217ENST00000482647 NBEAL1Q6ZS30 2694 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 ANKRD20A5PA0PJZ0 165 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 ACTL6BO94805 426 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 RPLP1P05386 114 aaKnown RBP16.37■□□□□ 0.21
SEC13-217ENST00000482647 PGAM2P15259 253 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 F2RP25116 425 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 PSMB8P28062 276 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 TAS2R31P59538 309 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 MRGPRG-AS1Q2M3A8 158 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 SCGB2B2Q4G0G5 96 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 UNQ5815/PRO19632Q6UWF5 114 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 MMD2Q8IY49 270 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 Q8N402 240 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 LFNGQ8NES3 379 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 ZNF486Q96H40 463 aaPredicted RBP16.37■□□□□ 0.21
SEC13-217ENST00000482647 PLEKHA2Q9HB19 425 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 WNK1Q9H4A3 2382 aa16.37■□□□□ 0.21
SEC13-217ENST00000482647 IGLV1-40P01703 118 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 PF4V1P10720 104 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 NQO2P16083 231 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 SLC6A1P30531 599 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 ETV6P41212 452 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 SSBP2P81877 361 aaPredicted RBP16.36■□□□□ 0.21
SEC13-217ENST00000482647 TNXAQ16473 311 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 C19orf54Q5BKX5 351 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 PUSL1Q8N0Z8 303 aaKnown RBP16.36■□□□□ 0.21
SEC13-217ENST00000482647 TMEM68Q96MH6 324 aa16.36■□□□□ 0.21
SEC13-217ENST00000482647 ZNF430Q9H8G1 570 aaPredicted RBP16.36■□□□□ 0.21
SEC13-217ENST00000482647 A0A1W2PN81 502 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 KBTBD11O94819 623 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 ZNF735P0CB33 412 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 CD40LGP29965 261 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 CHRNA7P36544 502 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 FAAP20Q6NZ36 180 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 LCNL1Q6ZST4 164 aa16.35■□□□□ 0.21
SEC13-217ENST00000482647 TBC1D26Q86UD7 250 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms