RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RRHO14718 337 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 TCRBP04435 133 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 AMY1AP04745 511 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 SERPINE2P07093 398 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-208ENST00000482310 G6PCP35575 357 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 GNB1P62873 340 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 RELBQ01201 579 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 PSG5Q15238 335 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 TRIM16LQ309B1 348 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 C16orf82Q7Z2V1 217 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 NRARPQ7Z6K4 114 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 SGPP2Q8IWX5 399 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 CASTOR1Q8WTX7 329 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 R3HDM4Q96D70 268 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 C1RLQ9NZP8 487 aa10.52□□□□□ -0.73
HDAC1-208ENST00000482310 HPRT1P00492 218 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 KRASP01116 189 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 SPNP16150 400 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 SLC6A1P30531 599 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 PPP1R1AQ13522 171 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 C5orf64Q2M2E5 130 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 VMA21Q3ZAQ7 101 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 Q6ZSV7 163 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 FAM71E2Q8N5Q1 922 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 RNASE11Q8TAA1 199 aaKnown RBP10.51□□□□□ -0.73
HDAC1-208ENST00000482310 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
HDAC1-208ENST00000482310 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 ABHD5Q8WTS1 349 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 HSPB9Q9BQS6 159 aa10.51□□□□□ -0.73
HDAC1-208ENST00000482310 FCN1O00602 326 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 NDUFA3O95167 84 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 CA2P00918 260 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 HRASP01112 189 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 IGKV1-39P01597 117 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 IGKV1D-39P04432 117 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 AKR1C2P52895 323 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 RAG2P55895 527 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 TAS2R31P59538 309 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 ERVK-16P61578 105 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 SUPT4H1P63272 117 aaKnown RBP10.5□□□□□ -0.73
HDAC1-208ENST00000482310 PJVKQ0ZLH3 352 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
HDAC1-208ENST00000482310 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 NPBQ8NG41 125 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 RHOVQ96L33 236 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 PRSS22Q9GZN4 317 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 ZNF702PQ9H963 129 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
HDAC1-208ENST00000482310 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 MARCH11A6NNE9 402 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 M0QZK8 103 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC1-208ENST00000482310 FGF16O43320 207 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 SPDEFO95238 335 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 HLA-AP01891 365 aaKnown RBP10.49□□□□□ -0.73
HDAC1-208ENST00000482310 NQO2P16083 231 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 MDKP21741 143 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-208ENST00000482310 LGALS7P47929 136 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 TMEM128Q5BJH2 165 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 TMEM268Q5VZI3 342 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 OR4A47Q6IF82 309 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 LIN54Q6MZP7 749 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 SLC25A42Q86VD7 318 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 OR8H1Q8NGG4 311 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 LHFPL5Q8TAF8 219 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 RNF5Q99942 180 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 RANBP3Q9H6Z4 567 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-208ENST00000482310 PLEKHA2Q9HB19 425 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 PARP11Q9NR21 331 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 COMMD9Q9P000 198 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 KCNIP3Q9Y2W7 256 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 NUBP2Q9Y5Y2 271 aa10.49□□□□□ -0.73
HDAC1-208ENST00000482310 TRAV3A0A0B4J244 114 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 CNIH1O95406 144 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 OPN1MWP04001 364 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 OR4E1P0C645 316 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 APELAP0DMC3 54 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 OPN1MW2P0DN77 364 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 OPN1MW3P0DN78 364 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 ANXA3P12429 323 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 MYOD1P15172 320 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 UCP1P25874 307 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-208ENST00000482310 OR2B8PP59922 312 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 UBE2MP61081 183 aaKnown RBP10.48□□□□□ -0.73
HDAC1-208ENST00000482310 UBE2KP61086 200 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 TMEM187Q14656 261 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 TNXAQ16473 311 aa10.48□□□□□ -0.73
HDAC1-208ENST00000482310 SLC35E3Q7Z769 313 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms