RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 MYO9BQ13459 2157 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PS18 150 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 CDIPTO14735 213 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 NGFP01138 241 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 CCL2P13500 99 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 TMPRSS3P57727 454 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 RPS16P62249 146 aaKnown RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 CX3CL1P78423 397 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 ARF1P84077 181 aaKnown RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 ABHD3Q8WU67 409 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 FAM103A1Q9BTL3 118 aaKnown RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 YTHDF2Q9Y5A9 579 aaKnown RBP11.32□□□□□ -0.6
C9orf78-205ENST00000480023 USF3Q68DE3 2245 aa11.32□□□□□ -0.6
C9orf78-205ENST00000480023 SDK2Q58EX2 2172 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 IGKV3D-15A0A087WSY6 115 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 RRHO14718 337 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 NEURL1O76050 574 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 IGHEP01854 428 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 EN2P19622 333 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-205ENST00000480023 ZNF83P51522 516 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 ERVK11-1P61568 191 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 C19orf35Q6ZS72 473 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 Q8IYB0 196 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 UBALD1Q8TB05 177 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 APH1AQ96BI3 265 aa11.31□□□□□ -0.6
C9orf78-205ENST00000480023 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 LAMA1P25391 3075 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 DPRXA6NFQ7 191 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 SIRPB1O00241 398 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 C3orf79P0CE67 100 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 RAC2P15153 192 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 HNF1AP20823 631 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 TSPOP30536 169 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 TREML4Q6UXN2 200 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 NIT1Q86X76 327 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-205ENST00000480023 NCKAP5O14513 1909 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 IGHV2OR16-5A0A0B4J2B6 119 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 IGHV5-10-1A0A0J9YXX1 117 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 C3orf80F5H4A9 247 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 IGHV3-9P01782 118 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 AREGP15514 252 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 TAAR6Q96RI8 345 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 NAT8BQ9UHF3 227 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
C9orf78-205ENST00000480023 DIDO1Q9BTC0 2240 aaKnown RBP11.29□□□□□ -0.6
C9orf78-205ENST00000480023 IGHV2-70DA0A0C4DH43 119 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PN81 502 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 MRPL33O75394 65 aaKnown RBP11.29□□□□□ -0.6
C9orf78-205ENST00000480023 GCHFRP30047 84 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 CLDN18P56856 261 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 HTD2P86397 168 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 ZNF146Q15072 292 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 LYG1Q8N1E2 194 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 PNKDQ8N490 385 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 MGST2Q99735 147 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A096LPE4 126 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PPZ6 126 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 A0A1W2PQM1 296 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 RHOBP62745 196 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 SSPNQ14714 243 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-205ENST00000480023 GALMQ96C23 342 aa11.29□□□□□ -0.6
C9orf78-205ENST00000480023 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-205ENST00000480023 ESPL1Q14674 2120 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 ZNHIT1O43257 154 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 PMCHP20382 165 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 ARR3P36575 388 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
C9orf78-205ENST00000480023 SPINK9Q5DT21 86 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 TMPRSS7Q7RTY8 843 aa11.28□□□□□ -0.6
C9orf78-205ENST00000480023 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms