RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 HRASP01112 189 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 RLN2P04090 185 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 CXCL2P19875 107 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 RPS16P62249 146 aaKnown RBP9.05□□□□□ -0.96
APTX-223ENST00000479656 POLR2GP62487 172 aaKnown RBP eCLIP9.05□□□□□ -0.96
APTX-223ENST00000479656 MIDNQ504T8 468 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 PRSS54Q6PEW0 395 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 PDPNQ86YL7 162 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 DYNAPQ8N1N2 210 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 C9orf62Q8N4C0 152 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 WFDC11Q8NEX6 87 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 RITA1Q96K30 269 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 RHOVQ96L33 236 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 ARPC5LQ9BPX5 153 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 ABCA12Q86UK0 2595 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 IGHV3OR16-10A0A075B7F0 116 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 A0A1W2PPI3 338 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TXNL1O43396 289 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 DEDDO75618 318 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TGFAP01135 160 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TMEM177Q53S58 311 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TMEM65Q6PI78 240 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 OR4C13Q8NGP0 309 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 OSR1Q8TAX0 266 aaPredicted RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 DCUN1D4Q92564 292 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 RCL1Q9Y2P8 373 aaKnown RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 HSPB11Q9Y547 144 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 POMT1Q9Y6A1 747 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 ABCA2Q9BZC7 2435 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TIMM23O14925 209 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 RBMXL2O75526 392 aaKnown RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 AVPP01185 164 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 IGHV4-31P0DP07 118 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 LYL1P12980 280 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 RAB13P51153 203 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 AP2S1P53680 142 aaPredicted RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 TMEM249Q2WGJ8 235 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 MINOS1Q5TGZ0 78 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 OR4A47Q6IF82 309 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 HARBI1Q96MB7 349 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 MS4A7Q9GZW8 240 aaPredicted RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 ZFP57Q9NU63 452 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 COA4Q9NYJ1 87 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TNFSF18Q9UNG2 199 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
APTX-223ENST00000479656 MINOS1-NBL1R4GNA1 71 aa9.04□□□□□ -0.96
APTX-223ENST00000479656 WNK2Q9Y3S1 2297 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 L7N2F9 121 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 NPFFO15130 113 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 CHST1O43916 411 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 PET100P0DJ07 73 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 GATA3P23771 443 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 CD24P25063 80 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 SAA4P35542 130 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 OR2B8PP59922 312 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 RELBQ01201 579 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 POU2AF1Q16633 256 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 OR8H3Q8N146 312 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 MALSU1Q96EH3 234 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 FOXC2Q99958 501 aa9.03□□□□□ -0.96
APTX-223ENST00000479656 QTRT1Q9BXR0 403 aaKnown RBP9.03□□□□□ -0.96
APTX-223ENST00000479656 TRAV40A0A0B4J280 105 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 SSSCA1O60232 199 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 IGHV1-69P01742 117 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 IL6RP08887 468 aaPredicted RBP9.02□□□□□ -0.96
APTX-223ENST00000479656 SAA1P0DJI8 122 aaPredicted RBP9.02□□□□□ -0.96
APTX-223ENST00000479656 CIARTQ8N365 385 aaPredicted RBP9.02□□□□□ -0.96
APTX-223ENST00000479656 OR4A16Q8NH70 328 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 CFHR4Q92496 578 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 AIFM2Q9BRQ8 373 aa9.02□□□□□ -0.96
APTX-223ENST00000479656 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
APTX-223ENST00000479656 RNF222A6NCQ9 220 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 MSGN1A6NI15 193 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 FAM90A9PA6NNJ1 464 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 OOSP1A8MZH6 123 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 E5RGE8 158 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 WRBO00258 174 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 SNAPC5O75971 98 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 IGLV2-23P01705 113 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 CNTFRP26992 372 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 CD1BP29016 333 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 LGALS7P47929 136 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 ARHGDIBP52566 201 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 PUSL1Q8N0Z8 303 aaKnown RBP9.02□□□□□ -0.97
APTX-223ENST00000479656 INO80EQ8NBZ0 244 aaPredicted RBP9.02□□□□□ -0.97
APTX-223ENST00000479656 C11orf1Q9H5F2 150 aa9.02□□□□□ -0.97
APTX-223ENST00000479656 NAV2Q8IVL1 2488 aa9.01□□□□□ -0.97
APTX-223ENST00000479656 UPK2O00526 184 aa9.01□□□□□ -0.97
APTX-223ENST00000479656 SYNGR2O43760 224 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms